Alternatives and similar repositories for 5loclung

Users that are interested in 5loclung are comparing it to the libraries listed below

• soumelis-lab / ICELLNET
  ☆21Updated 5 months ago
• cbib / Seurat-Integrate
  R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an int…
  ☆31Updated 3 months ago
• yunshun / HumanBreast10X
  ☆27Updated 3 years ago
• ventolab / Human-Gonadal-Development-Atlas_HGDA
  ☆21Updated 11 months ago
• YangJAT / HCA
  Hierarchical Cell Annotation
  ☆26Updated last year
• jcolinge / BulkSignalR
  BulkSignalR
  ☆24Updated 4 months ago
• MarioniLab / hbca
  Code used to process the data of the HBCA project
  ☆32Updated last year
• XZouProjects / scCODE
  The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data
  ☆14Updated 2 years ago
• wuaipinglab / scImmuCC
  Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.
  ☆10Updated last year
• ZxZhou4150 / Redeconve
  Deconvolution of spatial transcriptomics at single-cell resolution
  ☆20Updated last year
• sdentro / copykat_pipeline
  ☆13Updated last year
• parveendabas / GBMatlas
  ☆18Updated 3 years ago
• quadbio / organoid_regulomes
  Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids
  ☆30Updated 2 years ago
• LungCellAtlas / scRNAseq_pipelines
  Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas
  ☆39Updated 4 years ago
• SGDDNB / GeneSwitches
  Ordering gene-expression and functional events in single-cell experiments
  ☆27Updated last year
• zgyaru / anti-PD1_ESCC
  ☆17Updated 2 years ago
• alexQiSong / scSTEM
  Single cell STEM (scSTEM) is a shiny app based R package for visualizing and clustering genes in pseudotime ordered single cell RNA-seq d…
  ☆19Updated 3 years ago
• dpeerlab / progressive-plasticity-crc-metastasis
  Notebooks for generating figures in "Progressive Plasticity During Colorectal Cancer Metastasis"
  ☆16Updated last year
• ventolab / Human-Endometrial-Cell-Atlas_HECA
  Human Endometrial Cell Atlas (HECA). An integrated single-cell reference atlas of the human endometrium.
  ☆29Updated last year
• CamaraLab / ConDecon
  R package: ConDecon is a clustering-independent deconvolution method for estimating cell abundances in bulk tissues using single-cell RNA…
  ☆13Updated last year
• CICAMS-Liu-lab / ECGEA
  ☆16Updated 4 years ago
• dpeerlab / pdac-progression
  ☆10Updated 2 years ago
• LuChenLab / inferCC
  Lung cancer 10X analysis
  ☆11Updated 4 years ago
• Jiaxin-Fan / MuSiC2
  cell type deconvolution for multi-condition bulk RNA-seq data
  ☆29Updated 3 years ago
• karthikj89 / scgenetics
  identifying disease critical cell types and programs from single cell RNAseq
  ☆57Updated 3 years ago
• phillipnicol / scDist
  Robust identification of perturbed cell types in single-cell RNA-seq data
  ☆35Updated last month
• klarman-cell-observatory / HTAPP-Pipelines
  A record of the analysis pipelines used to create the HTAPP data
  ☆33Updated 8 months ago
• madhavmantri / chicken_heart
  Spatiotemporal single-cell RNA sequencing of developing hearts reveals interplay between cellular differentiation and morphogenesis
  ☆13Updated 2 years ago
• ludvigla / STUtility_web_site
  ☆15Updated 3 years ago
• wanglabtongji / STRIDE
  STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …
  ☆26Updated last year