Alternatives and similar repositories for 5loclung

Users that are interested in 5loclung are comparing it to the libraries listed below

• soumelis-lab / ICELLNET
  ☆20Updated 2 months ago
• stephenslab / gbcd
  R package for generalized binary covariance decomposition.
  ☆10Updated 2 months ago
• sdentro / copykat_pipeline
  ☆13Updated last year
• yunshun / HumanBreast10X
  ☆26Updated 3 years ago
• YangJAT / HCA
  Hierarchical Cell Annotation
  ☆26Updated 10 months ago
• alexQiSong / scSTEM
  Single cell STEM (scSTEM) is a shiny app based R package for visualizing and clustering genes in pseudotime ordered single cell RNA-seq d…
  ☆18Updated 3 years ago
• ludvigla / STUtility_web_site
  ☆15Updated 3 years ago
• cbib / Seurat-Integrate
  R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an int…
  ☆31Updated last week
• jcolinge / BulkSignalR
  BulkSignalR
  ☆24Updated last month
• MarioniLab / hbca
  Code used to process the data of the HBCA project
  ☆32Updated last year
• ventolab / Human-Endometrial-Cell-Atlas_HECA
  Human Endometrial Cell Atlas (HECA). An integrated single-cell reference atlas of the human endometrium.
  ☆26Updated last year
• ventolab / Human-Gonadal-Development-Atlas_HGDA
  ☆21Updated 8 months ago
• dpeerlab / progressive-plasticity-crc-metastasis
  Notebooks for generating figures in "Progressive Plasticity During Colorectal Cancer Metastasis"
  ☆16Updated 9 months ago
• XZouProjects / scCODE
  The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data
  ☆14Updated last year
• ventolab / Human-Uterus-Cell-Altas_UHCA
  UHCA
  ☆11Updated 7 months ago
• CICAMS-Liu-lab / ECGEA
  ☆16Updated 4 years ago
• ZxZhou4150 / Redeconve
  Deconvolution of spatial transcriptomics at single-cell resolution
  ☆18Updated 11 months ago
• LungCellAtlas / scRNAseq_pipelines
  Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas
  ☆38Updated 4 years ago
• hsmaan / Iniquitate
  Analysis of imbalanced data and its impacts in a scRNA-seq integration setting
  ☆30Updated 6 months ago
• miccec / GBMstates
  Scripts from the GBM cellular states paper
  ☆19Updated 4 years ago
• LuChenLab / inferCC
  Lung cancer 10X analysis
  ☆11Updated 4 years ago
• gabrielakinker / CCLE_heterogeneity
  ☆58Updated last year
• tudaga / LabelCorrection
  Python code for cross-condition label refinement in single-cell data with HiDDEN
  ☆14Updated 11 months ago
• JunyueCaoLab / EasySci
  Computational pipeline to process EasySci-RNA data.
  ☆21Updated last year
• parveendabas / GBMatlas
  ☆18Updated 2 years ago
• secrierlab / EMT
  This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.
  ☆13Updated 2 years ago
• quadbio / organoid_regulomes
  Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids
  ☆29Updated 2 years ago
• KramannLab / visium_heart
  Spatial transcriptomics of heart tissue
  ☆24Updated 3 years ago
• JinmiaoChenLab / FastIntegration
  FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis
  ☆23Updated 10 months ago
• PaulingLiu / metaICB
  ☆22Updated 2 years ago