xiaoyeye / TFveloLinks
☆45Updated last year
Alternatives and similar repositories for TFvelo
Users that are interested in TFvelo are comparing it to the libraries listed below
Sorting:
- R implementation of GeneTrajectory☆65Updated last year
- Gene group activity utility functions for Scanpy☆93Updated 10 months ago
- ☆40Updated 2 years ago
- ☆59Updated 4 months ago
- Single-Cell Analysis of Inter-Individual Variability by Interpretable Tensor Decomposition☆61Updated last year
- Predict RNA velocity through deep learning☆71Updated last year
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆26Updated 8 months ago
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆23Updated last year
- Aligning gene expression trajectories of single-cell reference and query systems☆76Updated 2 months ago
- Python package to find communication-driven intercellular flows from single-cell RNA-sequencing and spatial transcriptomics data.☆78Updated 6 months ago
- Functional Inference of Gene Regulation☆48Updated last year
- ☆38Updated 4 months ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆28Updated 4 years ago
- Python implementation of Gene Trajectory☆28Updated last year
- Spatial Cellular Estimator for Tumors☆58Updated 2 weeks ago
- Accurate and fast cell marker gene identification with COSG☆51Updated last week
- inferring regulatory cellular dynamics☆58Updated last month
- Estimation of Single-Cell Potency with Single Cell Entropy☆43Updated 2 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated 10 months ago
- A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative mod…☆25Updated 4 months ago
- Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organiz…☆38Updated 4 years ago
- Single-cell Lung Cancer Atlas with 1.2M cells☆69Updated 9 months ago
- Single cell omics biology annotations☆51Updated 6 months ago
- Code to reproduce the analysis of "Decoding gene regulation in the mouse embryo using single-cell multi-omics""☆40Updated 3 years ago
- R package for pathway analysis in scRNA-seq data☆75Updated last year
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated last year
- A tool for semi-automatic cell type harmonization and integration☆111Updated 7 months ago
- ☆30Updated 2 months ago
- Scripts and notebooks to reproduce all analysis from Massoni-Badosa et al. (2022)☆32Updated 9 months ago
- Single-Cell Inference of Class Switch Recombination☆19Updated last month