JerryZhang-1222 / starTracer

Related projects ⓘ

Alternatives and complementary repositories for starTracer

• liziyie / Onco-fetal-CAF-in-HCC
  ☆17Updated last year
• yanailab / PanCancer
  Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…
  ☆26Updated 2 years ago
• yqq-chen / CRC_ICB
  ☆25Updated 9 months ago
• Coolgenome / TCM
  Codes used in pan-T cell analysis
  ☆49Updated last year
• jalon9358 / LianLab_CRCLM
  ☆11Updated last year
• liziyie / scDVA
  An R shiny based tool used for single cell RNA-seq data visualization and analysis.
  ☆32Updated 3 years ago
• arc85 / celltalker
  Inference of cell-cell communication from single-cell RNAseq data
  ☆46Updated last year
• lifei176 / Single-cell-atlas-of-sex-differences-and-androgen-effects
  ☆16Updated 8 months ago
• jumphone / Vector
  Unsupervised Inference of Developmental Directions for Single Cells
  ☆21Updated 10 months ago
• genecell / COSG
  Accurate and fast cell marker gene identification with COSG
  ☆38Updated last year
• Core-Bioinformatics / MASLD-NASH
  scripts associated with NAFLD-NASH project
  ☆20Updated 5 months ago
• Junjie-Hu / NSCLC-immunotherapy
  ☆17Updated 10 months ago
• compbioNJU / scPDAC
  R code used to analyze single cell PDAC data
  ☆30Updated 4 months ago
• Chuxj / CRC-atlas
  ☆18Updated 5 months ago
• youqiongye / CRC_scRNAseq
  ☆42Updated 2 years ago
• bio-Pixel / panVC
  ☆31Updated 8 months ago
• Yelab2020 / Cottrazm
  Construct Tumor Transition Zone Microenvironment
  ☆35Updated this week
• SGI-LungCancer / SingleCell
  Code repository for single cell RNA-seq
  ☆32Updated 4 years ago
• Teichlab / Genes2Genes
  Aligning gene expression trajectories of single-cell reference and query systems
  ☆46Updated last month
• Lan-lab / sc-GC
  ☆27Updated 2 years ago
• Aleksobrad / single-cell-rcc-pipeline
  Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…
  ☆40Updated 3 years ago
• arc85 / singleseqgset
  Gene set enrichment analysis for single-cell RNAseq data
  ☆28Updated last year
• ruipwang / GastricTME
  ☆14Updated last year
• perou-lab / MultiK
  MultiK is a data-driven tool that objectively assesses the optimal number(s) of clusters based on the concept of consensus clustering via…
  ☆21Updated last year
• PaulingLiu / metaICB
  ☆22Updated last year
• tiroshlab / 3ca
  Code for reproducing the analysis in Gavish et al. "The transcriptional hallmarks of intra-tumor heterogeneity across a thousand tumors".
  ☆82Updated 2 months ago
• smorabit / hdWGCNA_paper
  Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)
  ☆13Updated last year
• ThomasJamesMitchell / deSCeRNAMut
  Method for de novo mutation calling from droplet based single cell RNA seq data
  ☆12Updated 3 years ago
• ChanLab-UTSW / BreastCancer_Integrated
  ☆19Updated 7 months ago
• aerickso / SpatialInferCNV
  Clone Calling from Visium Spatial Transcriptomics of Cancer samples
  ☆59Updated last year