bnprks / BPCellsLinks
Scaling Single Cell Analysis to Millions of Cells
☆220Updated this week
Alternatives and similar repositories for BPCells
Users that are interested in BPCells are comparing it to the libraries listed below
Sorting:
- Conversion between scRNA-seq objects☆180Updated last month
- reticulate-free single cell format conversion☆178Updated last week
- Fast Wilcoxon and auROC☆187Updated 8 months ago
- ☆157Updated 2 weeks ago
- A Shiny web app for mapping datasets using Seurat v4☆131Updated 8 months ago
- ☆173Updated 2 months ago
- Generate high quality, publication ready visualizations for single cell transcriptomics data.☆201Updated last week
- LIANA: a LIgand-receptor ANalysis frAmework☆212Updated 11 months ago
- Multi-sample multi-group scRNA-seq analysis tools☆195Updated 2 months ago
- Methods for detecting doublets in single-cell sequencing data☆203Updated 2 weeks ago
- Easy single cell analysis platform for enrichment☆185Updated last week
- A Bayesian model for compositional single-cell data analysis☆170Updated 2 years ago
- A Fully Bayesian Inference of Tumor Microenvironment composition and gene expression☆200Updated 2 months ago
- Shiny Interactive Web Apps for Single-Cell Data☆193Updated 3 months ago
- Clone of the Bioconductor repository for the SingleR package.☆192Updated 3 weeks ago
- Reference-free cell-type deconvolution of multi-cellular spatially resolved transcriptomics data☆138Updated last month
- SEACells algorithm for Inference of transcriptional and epigenomic cellular states from single-cell genomics data☆164Updated 4 months ago
- AUCell: score single cells with gene regulatory networks☆160Updated last year
- Clustering scRNAseq by genotypes☆187Updated 8 months ago
- Significance analysis for clustering single-cell RNA-sequencing data☆117Updated 10 months ago
- Interfaces for HDF5-based Single Cell File Formats☆167Updated last year
- R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆268Updated this week
- This repository contains R code, with which you can create 3D UMAP and tSNE plots of Seurat analyzed scRNAseq data☆121Updated 2 years ago
- scplotter is an R package that is built upon plotthis. It provides a set of functions to visualize single-cell sequencing data in an easy…☆174Updated this week
- Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data☆230Updated 2 years ago
- scDIOR: Single cell data IO softwaRe☆144Updated 3 years ago
- Automated, probabilistic assignment of cell types in scRNA-seq data☆202Updated 2 years ago
- R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data☆289Updated 2 years ago
- Cell types enrichment analysis☆198Updated last year
- Convert Seurat objects to 10x Genomics Loupe files.☆132Updated 3 weeks ago