aristoteleo / spateo-tutorialsLinks
tutorials for spateo package
☆20Updated 9 months ago
Alternatives and similar repositories for spateo-tutorials
Users that are interested in spateo-tutorials are comparing it to the libraries listed below
Sorting:
- scNOVA : Single-Cell Nucleosome Occupancy and genetic Variation Analysis☆11Updated 2 years ago
- Mitochondrial Alteration Enrichment and Genome Analysis Toolkit☆22Updated last year
- ☆12Updated last year
- Snakemake pipeline for plate scATAC-seq processing☆26Updated last year
- The scripts used for the analyses in TOME project☆25Updated 10 months ago
- ☆10Updated 10 months ago
- Axolotl Regenerative Telencehpalon Interpretation via Spatiotemporal Transcriptomic Atlas☆21Updated 3 years ago
- cell type specific, trait-associated gene regulation☆29Updated 6 months ago
- ☆24Updated 2 years ago
- Codes used in LISTA project.☆14Updated last year
- python API to the CoGAPS NMF package☆19Updated 5 months ago
- AD regulome analysis☆12Updated 2 years ago
- single-cell Hi-C, scHi-C, Hi-C, 3D genome, nuclear organization, tensor decomposition☆19Updated 2 years ago
- SCRIP(Single Cell Regulatory network Inference using ChIP-seq) is a tool for evaluating the binding enrichment of specific TR at single-c…☆20Updated last year
- Python implementation of Gene Trajectory☆28Updated last year
- ☆20Updated 2 years ago
- ☆19Updated last year
- ☆38Updated 3 months ago
- PhyloVelo, Phylogeny-based transcriptomic velocity of single cells☆43Updated last month
- ☆51Updated last year
- ☆39Updated last month
- Paired Insertion Counting for snATAC-seq data☆17Updated 5 months ago
- ☆17Updated 2 years ago
- An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization☆18Updated 2 years ago
- single-cell clustering based on alternative splicing landscapes☆23Updated last year
- ☆11Updated 3 months ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated last year
- Single cell epigenomic clustering based on accessibility pattern☆23Updated 2 years ago
- iterative clustering pipeline of big single cell datasets.☆33Updated last month
- SClineager: a Bayesian hierarchical model that performs lineage tracing of single cells based on genetic markers☆10Updated last year