aristoteleo / spateo-tutorialsLinks
tutorials for spateo package
☆20Updated 6 months ago
Alternatives and similar repositories for spateo-tutorials
Users that are interested in spateo-tutorials are comparing it to the libraries listed below
Sorting:
- The scripts used for the analyses in TOME project☆24Updated 7 months ago
- Mitochondrial Alteration Enrichment and Genome Analysis Toolkit☆19Updated last year
- SCRIP(Single Cell Regulatory network Inference using ChIP-seq) is a tool for evaluating the binding enrichment of specific TR at single-c…☆20Updated 11 months ago
- Axolotl Regenerative Telencehpalon Interpretation via Spatiotemporal Transcriptomic Atlas☆19Updated 2 years ago
- ☆32Updated 5 months ago
- cell type specific, trait-associated gene regulation☆27Updated 2 months ago
- single-cell clustering based on alternative splicing landscapes☆21Updated last year
- Snakemake pipeline for plate scATAC-seq processing☆26Updated last year
- scNOVA : Single-Cell Nucleosome Occupancy and genetic Variation Analysis☆11Updated last year
- ☆23Updated 2 years ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated 9 months ago
- Scripts used to perform the analyses to study the Biology of Myeloid Cells in Glioma Microenvironments☆18Updated last month
- Code associated with the data analysis for Miyoshi & Morabito 2024☆17Updated 6 months ago
- PhyloVelo, Phylogeny-based transcriptomic velocity of single cells☆43Updated last year
- python API to the CoGAPS NMF package☆19Updated last month
- ☆20Updated 10 months ago
- ☆49Updated 10 months ago
- Scripts and notebooks to reproduce all analysis from Massoni-Badosa et al. (2022)☆28Updated 5 months ago
- Functions for single cell data analysis☆32Updated 4 years ago
- Python implementation of Gene Trajectory☆25Updated 9 months ago
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆26Updated 8 months ago
- Code & utilities for the manuscript "Lineage Recording Reveals the Phylodynamics, Plasticity and Paths of Tumor Evolution"☆12Updated 2 years ago
- ☆10Updated 6 months ago
- Single cell epigenomic clustering based on accessibility pattern☆23Updated 2 years ago
- R package of CSOmap(developing☆14Updated 3 years ago
- ☆45Updated last year
- analysis scripts related to Jin et al manuscript on scRNA seq in aging mouse brain☆19Updated last year
- Computational pipeline to process EasySci-RNA data.☆20Updated last year
- ☆28Updated 8 months ago
- Pipeline for designing custom probes against human genes☆17Updated 7 months ago