chloelulu / scMayoMapLinks
☆22Updated last year
Alternatives and similar repositories for scMayoMap
Users that are interested in scMayoMap are comparing it to the libraries listed below
Sorting:
- Methods for decontamination of single cell data☆47Updated 5 months ago
- ☆51Updated last year
- ☆47Updated 3 years ago
- ☆46Updated 11 months ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆107Updated 3 months ago
- Aligning gene expression trajectories of single-cell reference and query systems☆73Updated 9 months ago
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 3 months ago
- Code for reproducing the analysis in Gavish et al. "The transcriptional hallmarks of intra-tumor heterogeneity across a thousand tumors".☆119Updated 10 months ago
- Functions for single cell data analysis☆32Updated 4 years ago
- R package for Protein activity analysis of single-cell RNAseq.☆83Updated 2 years ago
- Code used to create the core and extended GBmap, including downstream analyses (cell-cell interactions, spatial transcriptomics deconvolu…☆58Updated 2 years ago
- R package for pathway analysis in scRNA-seq data☆75Updated 11 months ago
- ☆31Updated 2 years ago
- Codes used in pan-T cell analysis☆63Updated 2 years ago
- Integration of gut cell atlases☆27Updated 5 months ago
- Estimation of Single-Cell Potency with Single Cell Entropy☆42Updated 2 years ago
- Construct Tumor Transition Zone Microenvironment☆48Updated last month
- scGSVA: Perform GSVA for single cell RNA seq☆64Updated 8 months ago
- inferring cell-cell communication from scRNA-seq of ligand-receptor☆83Updated last year
- ☆61Updated 6 years ago
- ☆32Updated last year
- ☆28Updated last year
- Single cell RNA-seq analysis bundle☆35Updated 5 years ago
- Method for de novo mutation calling from droplet based single cell RNA seq data☆14Updated 3 years ago
- ☆30Updated 5 months ago
- Visualize the results of cell-cell communication analysis☆22Updated 2 years ago
- Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)☆16Updated 2 years ago
- A python-based package and software to predict metabolite mediated cell-cell communications by single-cell RNA-seq data☆76Updated last week
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆31Updated 2 years ago
- Draw phylogenetic trees of tumor evolution☆81Updated 2 years ago