ZJU-UoE-CCW-LAB / scCDCLinks
single-cell Contamination Detection and Correction
☆13Updated 8 months ago
Alternatives and similar repositories for scCDC
Users that are interested in scCDC are comparing it to the libraries listed below
Sorting:
- Deconvolution of spatial transcriptomics at single-cell resolution☆18Updated last year
- ☆21Updated 6 months ago
- Notebooks for generating figures in "Progressive Plasticity During Colorectal Cancer Metastasis"☆16Updated 9 months ago
- Ordering gene-expression and functional events in single-cell experiments☆23Updated last year
- ☆20Updated 2 months ago
- R tools for analysis and visualization of single-cell subclustering data☆17Updated last week
- ☆27Updated 2 weeks ago
- Independent Component Analysis decipher functional modules for better cell clustering and annotation☆17Updated 3 years ago
- ☆38Updated 3 weeks ago
- ☆12Updated last year
- Extracellular vesicle-derived miRNA-mediated cell-cell communication inference for single-cell transcriptomic data☆15Updated 5 months ago
- ☆15Updated 2 years ago
- ☆22Updated last year
- Trends in single cell papers☆16Updated 11 months ago
- R package for SIGMA, a clusterability measure for scRNA-seq data☆12Updated 3 years ago
- Computational pipeline to process EasySci-RNA data.☆21Updated last year
- ☆10Updated 2 months ago
- scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…☆15Updated 2 months ago
- We describe a transcriptional reference map of human natural killer (NK) cells based on analysis of scRNA-seq data from both blood and ti…☆12Updated 11 months ago
- cell type specific, trait-associated gene regulation☆27Updated 5 months ago
- Code used to process the data of the HBCA project☆32Updated last year
- ☆17Updated 2 years ago
- ☆15Updated 3 years ago
- ☆16Updated 4 years ago
- Obtain trait-relevant cell subpopulations by incorporating pathway activity transformed scRNA-seq data with GWAS data☆17Updated 9 months ago
- Code relating to http://dx.doi.org/10.2139/ssrn.4132721☆11Updated 2 years ago
- A record of the analysis pipelines used to create the HTAPP data☆33Updated 5 months ago
- Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)☆16Updated 2 years ago
- ☆18Updated 2 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated 9 months ago