neurorestore / LibraLinks
☆181Updated 8 months ago
Alternatives and similar repositories for Libra
Users that are interested in Libra are comparing it to the libraries listed below
Sorting:
- A guide to using a Seurat object in conjunction with RNA Velocity☆140Updated 4 years ago
- Significance analysis for clustering single-cell RNA-sequencing data☆123Updated last year
- reticulate-free single cell format conversion☆201Updated last week
- Gene set scoring for single-cell data☆177Updated 2 months ago
- Generate high quality, publication ready visualizations for single cell transcriptomics data.☆214Updated 3 weeks ago
- scDIOR: Single cell data IO softwaRe☆153Updated 3 years ago
- ☆199Updated last month
- Fast Wilcoxon and auROC☆203Updated last year
- Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data☆237Updated 2 years ago
- Cell type prioritization in single-cell data☆132Updated last year
- MultiNicheNet: a flexible framework for differential cell-cell communication analysis from multi-sample multi-condition single-cell trans…☆179Updated 5 months ago
- AUCell: score single cells with gene regulatory networks☆182Updated last year
- The integration of single cell rank-based gene set enrichment analysis☆142Updated 6 months ago
- Clone of the Bioconductor repository for the SingleR package.☆199Updated last week
- A tool for detecting somatic variants in single cell data☆216Updated last year
- This repository contains R code, with which you can create 3D UMAP and tSNE plots of Seurat analyzed scRNAseq data☆122Updated 2 years ago
- Conversion between scRNA-seq objects☆197Updated this week
- A Bayesian model for compositional single-cell data analysis☆185Updated 2 years ago
- R package to visualize gene expression data based on weighted kernel density estimation☆109Updated last year
- R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆285Updated last week
- LIANA: a LIgand-receptor ANalysis frAmework☆227Updated last year
- Interfaces for HDF5-based Single Cell File Formats☆170Updated 2 years ago
- R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the …☆121Updated last month
- R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data☆307Updated 3 years ago
- Clustering scRNAseq by genotypes☆192Updated 2 months ago
- A scalable SCENIC workflow for single-cell gene regulatory network analysis☆169Updated 3 years ago
- Quantifying metabolism activity at the single-cell resolution☆150Updated 6 months ago
- ☆263Updated 3 months ago
- Some tools for plotting single-cell data☆176Updated 8 months ago
- Methods for detecting doublets in single-cell sequencing data☆227Updated last month