neurorestore / LibraLinks
☆171Updated 3 weeks ago
Alternatives and similar repositories for Libra
Users that are interested in Libra are comparing it to the libraries listed below
Sorting:
- MultiNicheNet: a flexible framework for differential cell-cell communication analysis from multi-sample multi-condition single-cell trans…☆147Updated 4 months ago
- A guide to using a Seurat object in conjunction with RNA Velocity☆139Updated 3 years ago
- R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆258Updated 2 weeks ago
- R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data☆279Updated 2 years ago
- Generate high quality, publication ready visualizations for single cell transcriptomics data.☆195Updated last week
- reticulate-free single cell format conversion☆154Updated 5 months ago
- Significance analysis for clustering single-cell RNA-sequencing data☆116Updated 8 months ago
- A tool for detecting somatic variants in single cell data☆205Updated 8 months ago
- Gene set scoring for single-cell data☆151Updated 3 weeks ago
- Clone of the Bioconductor repository for the SingleR package.☆191Updated last week
- scDIOR: Single cell data IO softwaRe☆140Updated 3 years ago
- ☆235Updated 11 months ago
- Quantifying metabolism activity at the single-cell resolution☆136Updated 9 months ago
- Scissor package☆222Updated last year
- Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data☆227Updated 2 years ago
- This repository contains R code, with which you can create 3D UMAP and tSNE plots of Seurat analyzed scRNAseq data☆121Updated 2 years ago
- The integration of single cell rank-based gene set enrichment analysis☆122Updated 10 months ago
- Cell type prioritization in single-cell data☆119Updated 7 months ago
- A scalable SCENIC workflow for single-cell gene regulatory network analysis☆158Updated 2 years ago
- ☆139Updated last week
- ☆107Updated last year
- Single-nuclei RNA-seq and ATAC-seq in Alzheimer's disease☆93Updated 3 years ago
- Conversion between scRNA-seq objects☆174Updated last month
- CytoTRACE 2 is an interpretable AI method for predicting cellular potency and absolute developmental potential from scRNA-seq data.☆147Updated 2 months ago
- R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the …☆105Updated 2 months ago
- LIANA: a LIgand-receptor ANalysis frAmework☆204Updated 9 months ago
- Interfaces for HDF5-based Single Cell File Formats☆164Updated last year
- An R package to test for batch effects in high-dimensional single-cell RNA sequencing data.☆163Updated last year
- Methods to discover gene programs on single-cell data☆118Updated last month
- Clustering scRNAseq by genotypes☆182Updated 6 months ago