π¦ 𧬠Unraveling Viral Genomes from Metagenomes
β11Jul 30, 2026Updated last month
Alternatives and similar repositories for reneo
Users that are interested in reneo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Bioinformatics pipeline used in the Laboratory of Viral Metagenomics (KU Leuven) to trim and assemble paired-end Illumina reads, and clasβ¦β10Nov 6, 2025Updated 9 months ago
- Pipeline for metagenomic community analysis using DNA isolated from virus-like particlesβ13Mar 21, 2020Updated 6 years ago
- VIGOR4β23Aug 15, 2025Updated last year
- This is a deep learning method for identification of viral contigs with short length from metagenomic data.β10Dec 20, 2021Updated 4 years ago
- Code used to analyse and plot metadata of metagenomic binning toolsβ14Aug 22, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer β’ AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Tool to submit viral sequences to Genbank.β16May 14, 2026Updated 3 months ago
- A containerized bioinformatics pipeline for viral metagenomic data analysisβ41Apr 9, 2026Updated 4 months ago
- Reconstruction and analysis of viral and host genomes at multi-organ levelβ21Apr 10, 2026Updated 4 months ago
- π οΈπ§¬ A Software Framework to Manipulate Assembly Graphsβ21Aug 8, 2026Updated 3 weeks ago
- β15May 22, 2025Updated last year
- MGY441 Bioinformatics: Virus Discovery Projectβ24Dec 22, 2025Updated 8 months ago
- Set of tools for viral metagenomics.β17Aug 17, 2026Updated 2 weeks ago
- β22Jun 1, 2026Updated 3 months ago
- This is a pipeline for exploring viruses (ssDNA, dsDNA phage, and giant DNA viruses) and viral diversity in metagenomes.β18Mar 16, 2026Updated 5 months ago
- 1-Click AI Models by DigitalOcean Gradient β’ AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Discover and annotate the viromeβ64Jun 10, 2026Updated 2 months ago
- π«§π§¬ From fragmented assemblies to high-quality bacteriophage genomesβ86Aug 24, 2026Updated last week
- Jaeger is a quick and precise tool for detecting phages in sequence assemblies.β38Aug 25, 2026Updated last week
- Influenza genome analysis Nextflow workflowβ28Jun 3, 2026Updated 2 months ago
- Code and data used in Mollentze et al. (2021) "Identifying and prioritizing potential human-infecting viruses from their genome sequencesβ¦β19Apr 15, 2026Updated 4 months ago
- VirBot: a protein-based RNA virus detector for metagenomic dataβ35Jul 29, 2024Updated 2 years ago
- hecatomb is a virome analysis pipeline for analysis of Illumina sequence dataβ61Sep 23, 2025Updated 11 months ago
- A simple toolkit for manipulating nanopore signal dataβ20Mar 14, 2026Updated 5 months ago
- vaginal microbiotaβ13Jan 21, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer β’ AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Cookiecutter profile for making a Snakemake-based bioinformatics tool, but without the fluffβ51Oct 17, 2023Updated 2 years ago
- A fully convolutional architecture for basecalling nanopore RNA sequencing dataβ12Sep 26, 2024Updated last year
- A tool to measure bacteriophages plaque sizesβ17May 12, 2023Updated 3 years ago
- Code for de novo discovery of viral families in virome dataβ16Jun 20, 2024Updated 2 years ago
- Systematic ProtEin AnnotatoRβ19Sep 20, 2025Updated 11 months ago
- Providing up-to-date phage genome databases, metrics and useful input files for a number of bioinformatic pipelines.β83Apr 16, 2025Updated last year
- PyO3 bindings and Python interface to sylph, an ultrafast method for containment ANI querying and taxonomic profiling.β20Dec 12, 2024Updated last year
- Recovery of eukaryotic genomes using contrastive learning. A specialized metagenomic binning tool designed for recovering high-quality euβ¦β23Aug 20, 2026Updated last week
- β10Jun 9, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer β’ AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A Nextflow pipeline for viral genomics (Influenza/RSV) supporting Illumina and Nanopore sequencing of clinical and wastewater samples.β10Jun 9, 2026Updated 2 months ago
- Read contamination removalβ25Jan 24, 2024Updated 2 years ago
- manage ordinations and render biplots in a tidyverse workflowβ27Aug 23, 2026Updated last week
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)β72Aug 27, 2026Updated last week
- Workflow to rapidly quantify taxa from all domains of life, directly from short-read human gut metagenomesβ76Aug 13, 2026Updated 2 weeks ago
- INSaFLU-TELEVIR: an free web-based (but also locally installable) bioinformatics suite for virus metagenomic detection and routine genomiβ¦β43Updated this week
- kmer based feature extraction tool for bioinformatics, metagenomics, AI/ML and moreβ48Jul 12, 2026Updated last month