π¦ 𧬠Unraveling Viral Genomes from Metagenomes
β11Jul 30, 2026Updated 2 weeks ago
Alternatives and similar repositories for reneo
Users that are interested in reneo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Pipeline for metagenomic community analysis using DNA isolated from virus-like particlesβ13Mar 21, 2020Updated 6 years ago
- VIGOR4β23Aug 15, 2025Updated 11 months ago
- This is a deep learning method for identification of viral contigs with short length from metagenomic data.β10Dec 20, 2021Updated 4 years ago
- Code used to analyse and plot metadata of metagenomic binning toolsβ14Aug 22, 2024Updated last year
- Tool to submit viral sequences to Genbank.β16May 14, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer β’ AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A containerized bioinformatics pipeline for viral metagenomic data analysisβ39Apr 9, 2026Updated 4 months ago
- Reconstruction and analysis of viral and host genomes at multi-organ levelβ21Apr 10, 2026Updated 4 months ago
- π οΈπ§¬ A Software Framework to Manipulate Assembly Graphsβ21Updated this week
- β15May 22, 2025Updated last year
- MGY441 Bioinformatics: Virus Discovery Projectβ24Dec 22, 2025Updated 7 months ago
- Set of tools for viral metagenomics.β17Jun 1, 2026Updated 2 months ago
- β22Jun 1, 2026Updated 2 months ago
- This is a pipeline for exploring viruses (ssDNA, dsDNA phage, and giant DNA viruses) and viral diversity in metagenomes.β18Mar 16, 2026Updated 4 months ago
- Discover and annotate the viromeβ64Jun 10, 2026Updated 2 months ago
- GPU virtual machines on DigitalOcean Gradient AI β’ AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- π«§π§¬ From fragmented assemblies to high-quality bacteriophage genomesβ84Updated this week
- Jaeger is a quick and precise tool for detecting phages in sequence assemblies.β37Aug 3, 2026Updated last week
- Influenza genome analysis Nextflow workflowβ27Jun 3, 2026Updated 2 months ago
- Code and data used in Mollentze et al. (2021) "Identifying and prioritizing potential human-infecting viruses from their genome sequencesβ¦β19Apr 15, 2026Updated 3 months ago
- VirBot: a protein-based RNA virus detector for metagenomic dataβ34Jul 29, 2024Updated 2 years ago
- hecatomb is a virome analysis pipeline for analysis of Illumina sequence dataβ61Sep 23, 2025Updated 10 months ago
- A simple toolkit for manipulating nanopore signal dataβ20Mar 14, 2026Updated 4 months ago
- vaginal microbiotaβ13Jan 21, 2025Updated last year
- Cookiecutter profile for making a Snakemake-based bioinformatics tool, but without the fluffβ51Oct 17, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways β’ AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A fully convolutional architecture for basecalling nanopore RNA sequencing dataβ12Sep 26, 2024Updated last year
- A tool to measure bacteriophages plaque sizesβ17May 12, 2023Updated 3 years ago
- Code for de novo discovery of viral families in virome dataβ16Jun 20, 2024Updated 2 years ago
- Systematic ProtEin AnnotatoRβ19Sep 20, 2025Updated 10 months ago
- Providing up-to-date phage genome databases, metrics and useful input files for a number of bioinformatic pipelines.β83Apr 16, 2025Updated last year
- PyO3 bindings and Python interface to sylph, an ultrafast method for containment ANI querying and taxonomic profiling.β20Dec 12, 2024Updated last year
- Recovery of eukaryotic genomes using contrastive learning. A specialized metagenomic binning tool designed for recovering high-quality euβ¦β22Jul 17, 2026Updated 3 weeks ago
- β10Jun 9, 2025Updated last year
- A Nextflow pipeline for viral genomics (Influenza/RSV) supporting Illumina and Nanopore sequencing of clinical and wastewater samples.β10Jun 9, 2026Updated 2 months ago
- AI Agents on DigitalOcean Gradient AI Platform β’ AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Read contamination removalβ25Jan 24, 2024Updated 2 years ago
- manage ordinations and render biplots in a tidyverse workflowβ27Jul 25, 2026Updated 2 weeks ago
- Workflow to rapidly quantify taxa from all domains of life, directly from short-read human gut metagenomesβ76Dec 1, 2025Updated 8 months ago
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)β72Jul 16, 2026Updated 3 weeks ago
- INSaFLU-TELEVIR: an free web-based (but also locally installable) bioinformatics suite for virus metagenomic detection and routine genomiβ¦β43Aug 6, 2026Updated last week
- kmer based feature extraction tool for bioinformatics, metagenomics, AI/ML and moreβ47Jul 12, 2026Updated last month
- π¦π§¬ Binning Metagenomic Contigs via Composition, Coverage and Assembly Graphsβ69Jul 26, 2026Updated 2 weeks ago