Vini2 / reneoLinks
π¦ 𧬠Unraveling Viral Genomes from Metagenomes
β10Updated 3 months ago
Alternatives and similar repositories for reneo
Users that are interested in reneo are comparing it to the libraries listed below
Sorting:
- Systematic ProtEin AnnotatoRβ19Updated 4 months ago
- From genomes to phenotypes: Traitar3, the microbial trait analyzer (for Python3)β21Updated last year
- Influenza genome analysis Nextflow workflowβ24Updated 2 weeks ago
- hAMRoaster is an analysis pipeline that can compare the output of tools for detecting AMR genes and provide metrics of their performanceβ22Updated last year
- Resolving Species Level Classification Using Emuβ14Updated last year
- β11Updated last year
- Protologgger is a tool for the description of novel taxa by providing taxonomic, functional and ecological insightsβ16Updated last month
- β10Updated last month
- Compute strain abundance in a defined microbial communityβ10Updated 2 years ago
- A containerized bioinformatics pipeline for viral metagenomic data analysisβ37Updated last year
- Metaphor: a general-purpose workflow for assembly and binning of metagenomesβ40Updated 2 months ago
- This is a deep learning method for identification of viral contigs with short length from metagenomic data.β10Updated 4 years ago
- Reference Phylogeny for Bacterial and Archaeal Genomesβ25Updated 5 months ago
- skandiver is a program for identifying mobile genetic elements (prophages, plasmids, transposases, etc.) from assembled whole genome sequβ¦β13Updated 2 months ago
- A tool easily taken advantage of for in silico serogrouping of Pseudomonas aeruginosa isolatesβ13Updated last year
- UPHL's Reference Free Pipelineβ27Updated 2 months ago
- MAG Circularization Methodβ32Updated 2 months ago
- Download assembly files from NCBIβ13Updated 2 years ago
- Meteor is a plateform for quantitative metagenomics profiling of complex ecosystems. Meteor relies on genes catalogue to perform species-β¦β34Updated last month
- A functional profiler for metagenomes using FracMinHashβ20Updated 6 months ago
- β22Updated 2 years ago
- k-mer based Pipeline to identify the Serotype from Illumina NGS readsβ26Updated 2 years ago
- Remove contaminated contigs from genomes using k-mers and taxonomies.β59Updated 2 years ago
- map Illumina metagenomes to genomes!β38Updated this week
- Annotation of Metabolite Origin via Networks: A tool for predicting putative metabolite origins for microbes or between microbes and hostβ¦β25Updated last week
- Discover and annotate the viromeβ58Updated 3 months ago
- Non-redundant pangenome assemblies from multiple genomes or binsβ15Updated 8 months ago
- Plot genome alignment figure using progressiveMauve & genoPlotRβ22Updated 3 years ago
- Read contamination removalβ25Updated last year
- Olivar: towards automated variant aware primer design for multiplex tiled amplicon sequencing of pathogensβ36Updated last week