A tool to measure bacteriophages plaque sizes
☆18May 12, 2023Updated 2 years ago
Alternatives and similar repositories for plaque_size_tool
Users that are interested in plaque_size_tool are comparing it to the libraries listed below
Sorting:
- ☆38Dec 6, 2023Updated 2 years ago
- Accelerate common Petri dish assays with AI.☆15Oct 28, 2025Updated 4 months ago
- 🦠🧬 Unraveling Viral Genomes from Metagenomes☆10Oct 3, 2025Updated 5 months ago
- Python CLI for alignment-free genomics.☆13Feb 11, 2026Updated 3 weeks ago
- Gene Absence Presence Identification tool.☆27Mar 28, 2025Updated 11 months ago
- A curated list of phage related software and computational resources for phage scientists, bioinformaticians and enthusiasts.☆49Jul 12, 2022Updated 3 years ago
- A software for gap filling in genome assemblies☆10Aug 12, 2022Updated 3 years ago
- Locate antiviral defence systems in prokaryotic genomes☆68Oct 22, 2024Updated last year
- Jaeger is a quick and precise tool for detecting phages in sequence assemblies.☆35Jan 22, 2026Updated last month
- Code used to analyse and plot metadata of metagenomic binning tools☆14Aug 22, 2024Updated last year
- Workflow to assign Taxonomy to a bacteriophage genome isolate☆38Mar 25, 2025Updated 11 months ago
- Rapid discovery of novel prophages using biological feature engineering and machine learning☆37Dec 20, 2024Updated last year
- Unleash the full power of your k-mers!☆24Jan 13, 2026Updated last month
- µbinfie blog☆19Jul 21, 2025Updated 7 months ago
- A FUSE filesystem to browse & edit FASTA files☆20Oct 18, 2024Updated last year
- A hybrid assembly and MAG recovery pipeline (and more!)☆104Jan 27, 2026Updated last month
- A simple toolkit for manipulating nanopore signal data☆19Sep 24, 2024Updated last year
- Phage annotations and predictions. A spae is a prediction or foretelling. We'll foretell you what your phage is doing!☆41Feb 26, 2026Updated last week
- A tool for identifying active prophage elements through read mapping☆13Oct 9, 2023Updated 2 years ago
- Differential k-mer analysis☆40Jan 29, 2024Updated 2 years ago
- ☆18May 13, 2021Updated 4 years ago
- A flexible and modular software suite for domain-based gene neighborhood and protein search, extraction, and clustering.☆28Feb 10, 2026Updated 3 weeks ago
- 🫧🧬 From fragmented assemblies to high-quality bacteriophage genomes☆81Dec 4, 2025Updated 3 months ago
- ☆21Nov 17, 2022Updated 3 years ago
- ☆11Jul 3, 2022Updated 3 years ago
- k-mers and the like☆22Updated this week
- Convert genbank files to a swath of other formats☆30Updated this week
- De novo VIral Genome Annotator☆24Jan 11, 2026Updated last month
- Bifrost graph gene caller.☆98Jan 20, 2026Updated last month
- population and community dynamics on spatial graphs, in julia.☆25May 21, 2025Updated 9 months ago
- viralComplete: BLAST-based viral completeness verification☆24Oct 4, 2021Updated 4 years ago
- hecatomb is a virome analysis pipeline for analysis of Illumina sequence data☆60Sep 23, 2025Updated 5 months ago
- Detection of phage RBPs based on protein domains and machine learning☆30Feb 5, 2025Updated last year
- Bacterial Annotation by Learned Representation of Genes☆60Jan 22, 2021Updated 5 years ago
- Genome size estimation from long read overlaps☆81Updated this week
- ProtSpace is program that helps in visualizing and investigating our protein embedding space.☆45Updated this week
- WtP: Phage identification via nextflow and docker or singularity☆104Feb 25, 2026Updated last week
- Comparisons of multiple different prophage predictions☆26Feb 12, 2026Updated 3 weeks ago
- PyO3 bindings and Python interface to skani, a method for fast genomic identity calculation using sparse chaining.☆29Aug 20, 2025Updated 6 months ago