Alternatives and similar repositories for msabrowser:

Users that are interested in msabrowser are comparing it to the libraries listed below

• LKremer / showTree
  showTree can visualize the phylogeny, protein sequences and protein domains of a gene family in one figure.
  ☆30Updated 5 years ago
• bioforensics / pytaxonkit
  Python bindings for the TaxonKit library
  ☆33Updated 2 weeks ago
• ablab / rnaquast
  Quality assessment of de novo transcriptome assemblies from RNA-Seq data
  ☆20Updated 2 months ago
• Guannan-Wang / GOMCL
  GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functions
  ☆20Updated last year
• cpockrandt / PhyloCSFpp
  PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…
  ☆30Updated 2 years ago
• ProwlerForNanopore / ProwlerTrimmer
  Trimming tool for Oxford Nanopore sequence data
  ☆22Updated 3 years ago
• AnWiercze / NanopoReaTA
  Nanopore Real-Time Analysis Tool
  ☆15Updated 4 months ago
• TimoLassmann / samstat
  SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.
  ☆24Updated last year
• appris / appris
  Annotating principal splice isoforms
  ☆14Updated 3 months ago
• myriad-opensource / samwell
  Samwell: a python package for using genomic files... well
  ☆19Updated 2 years ago
• IARCbioinfo / alignment-nf
  Whole Exome/Whole Genome Sequencing alignment pipeline
  ☆28Updated 4 months ago
• TrinityCTAT / CTAT-VirusIntegrationFinder
  ☆15Updated last year
• torkian / blast-QC
  A Quality Control filter and parser for NCBI BLAST XML results.
  ☆16Updated 4 years ago
• Gabaldonlab / EvolClust
  Evolcust retrieves groups of genes that appear clustered together in groups of species
  ☆15Updated 2 years ago
• biocore / wol
  Reference Phylogeny for Bacterial and Archaeal Genomes
  ☆25Updated last year
• cliu32 / Athlon
  Accurate Typing of Human Leukocyte Antigen (HLA) by Oxford Nanopore Sequencing
  ☆15Updated 6 years ago
• rrwick / Catpac
  a Contig Alignment Tool for Pairwise Assembly Comparison
  ☆13Updated 5 years ago
• AstraZeneca-NGS / simple_sv_annotation
  Simplify snpEff annotations for interesting cases
  ☆21Updated 5 years ago
• gamcil / clustermap.js
  ☆30Updated 3 years ago
• mol-evol / panGPT
  A Generative Pre-Trained Transformer Package for Pangenomes
  ☆50Updated 8 months ago
• CAMI-challenge / OPAL
  OPAL: Open-community Profiling Assessment tooL
  ☆27Updated this week
• linsalrob / genbank_to
  Convert genbank files to a swath of other formats
  ☆14Updated last year
• fab-araujo / gofeat
  GO FEAT: a rapid web-based functional annotation tool for genomic and transcriptomic data
  ☆17Updated 9 months ago
• saezlab / flop
  FunctionaL Omics Processing platform
  ☆13Updated 5 months ago
• bcgsc / SSAKE
  🍶 Genome assembly with short sequence reads
  ☆25Updated 11 months ago
• dputhier / pygtftk
  A python package and a set of shell commands to handle GTF files
  ☆45Updated 7 months ago
• vicsanga / Postre
  POSTRE: Prediction Of STRuctural variant Effects
  ☆21Updated 4 months ago
• ulelab / ultraplex
  Ultra-fast 5' and 3' demultiplexer
  ☆26Updated 8 months ago
• EvolBioInf / fur
  Find Unique genomic Regions
  ☆29Updated last week
• fmalmeida / ngs-preprocess
  A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies
  ☆31Updated 6 months ago