thekaplanlab / msabrowser
𧏠MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations
â32Updated 10 months ago
Alternatives and similar repositories for msabrowser:
Users that are interested in msabrowser are comparing it to the libraries listed below
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF fâŚâ31Updated 3 years ago
- Quality assessment of de novo transcriptome assemblies from RNA-Seq dataâ21Updated 5 months ago
- POSTRE: Prediction Of STRuctural variant Effectsâ21Updated last month
- k-mer similarity analysis pipelineâ21Updated 2 months ago
- đś Genome assembly with short sequence readsâ25Updated last year
- pathoscore evaluates variant pathogenicity tools and scores.â21Updated 3 years ago
- Hybridization probe design for targeted genomic sequencing of diverse and hypervariable viral taxaâ24Updated last year
- Master of Pores 2â23Updated 4 months ago
- SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.â24Updated last year
- Simplify snpEff annotations for interesting casesâ21Updated 6 years ago
- GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functionsâ20Updated last year
- Nanopore Real-Time Analysis Toolâ16Updated 7 months ago
- Inverted Repeats Finder: a program to analyze DNA and RNA sequencesâ16Updated last month
- Ultra-fast 5' and 3' demultiplexerâ27Updated 11 months ago
- A Generative Pre-Trained Transformer Package for Pangenomesâ50Updated 10 months ago
- GO FEAT: a rapid web-based functional annotation tool for genomic and transcriptomic dataâ17Updated last year
- showTree can visualize the phylogeny, protein sequences and protein domains of a gene family in one figure.â30Updated 6 years ago
- Simple utility to concatenate .fastq(.gz) files whilst creating a summary of the sequences.â36Updated 2 weeks ago
- TreeGrafter is a new software tool for annotating uncharacterized protein sequences, using annotated phylogenetic trees.â11Updated 4 years ago
- curPrimers is a tool for trimming primer sequences from amplicon based NGS readsâ16Updated 5 years ago
- Annotating principal splice isoformsâ14Updated 6 months ago
- A command line tool to compute mapping statistics from a BAM fileâ24Updated 3 years ago
- A Quality Control filter and parser for NCBI BLAST XML results.â16Updated 4 years ago
- Trimming tool for Oxford Nanopore sequence dataâ21Updated 3 years ago
- Whole Exome/Whole Genome Sequencing alignment pipelineâ28Updated 6 months ago
- A package for designing activity-informed nucleic acid diagnostics for viruses.â31Updated 2 years ago
- Tool package to perform in-silico CRISPR analysis and assessmentâ24Updated 11 months ago
- GRAph-based Finding of Individual Motif Occurrencesâ31Updated 7 months ago
- fastest GTF/GFF-to-BED converter chilling aroundâ25Updated 2 months ago
- Python bindings for the TaxonKit libraryâ36Updated this week