A phylogenetic profile analysis tool
☆38Mar 11, 2026Updated last week
Alternatives and similar repositories for PhyloProfile
Users that are interested in PhyloProfile are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Feature-aware Directed OrtholoG search☆14Mar 10, 2026Updated last week
- Parallel implementation of OrthoMCL☆21Aug 26, 2022Updated 3 years ago
- Phylogenetic profiling with orthology data☆13Oct 10, 2025Updated 5 months ago
- Perl script for manipulating multiple sequence alignments for phylogenetic reconstruction☆11Sep 29, 2014Updated 11 years ago
- Scripts to do haplotype analysis on pan genomes.☆20Sep 24, 2020Updated 5 years ago
- This is a pipeline describing how I assembled the complete genome of the freshwater angelfish, Pterophylllum scalare.☆14Oct 21, 2022Updated 3 years ago
- Sketch phylogenetic trees and networks☆24Feb 5, 2026Updated last month
- Systematic ProtEin AnnotatoR☆19Sep 20, 2025Updated 6 months ago
- Code repository for the Global Ant Genomics Alliance☆17Jun 16, 2025Updated 9 months ago
- A parallel API crawler for the retrieval of Kyoto Encyclopedia of Genes and Genomes metabolic and genomics data.☆21Jul 22, 2023Updated 2 years ago
- FASconCAT-G offers a wide range of possibilities to edit and concatenate multiple nucleotide, amino acid, and structure sequence alignmen…☆35Jun 12, 2024Updated last year
- Version 5 of the CAFE phylogenetics software☆164Mar 16, 2026Updated last week
- DETONATE: DE novo TranscriptOme rNa-seq Assembly with or without the Truth Evaluation☆14Jun 22, 2016Updated 9 years ago
- 🦠🧬 Unraveling Viral Genomes from Metagenomes☆10Oct 3, 2025Updated 5 months ago
- Bitpacked sequence trait and implementation☆16Feb 27, 2026Updated 3 weeks ago
- R Interface to the NCBI SRA metadata☆23Nov 19, 2018Updated 7 years ago
- The 3rd incarnation of the Wise package for sequence analysis☆23Jun 19, 2014Updated 11 years ago
- Scripts used in the annotation of B10K genomes☆15Jun 1, 2020Updated 5 years ago
- Quantifying Introgression via Branch Lengths☆56Sep 30, 2022Updated 3 years ago
- OrthoFiller: Identifying missing annotations for evolutionarily conserved genes.☆22Dec 1, 2022Updated 3 years ago
- An R package to perform systematic quality checks on comparative genomics analyses☆12Mar 5, 2026Updated 2 weeks ago
- Scripts used in the publication Tyler P. Barnum, Israel A. Figueroa, Charlotte I. Carlström, Lauren N. Lucas, Anna L. Engelbrektson, and …☆10Jun 19, 2019Updated 6 years ago
- ☆16Mar 15, 2026Updated last week
- A set of scripts to help automate the construction of data sets for multi-gene phylogenetic analyses.☆13Mar 13, 2019Updated 7 years ago
- Tools for phylogenetic data analysis including visualization and cluster-computing support.☆14Dec 18, 2021Updated 4 years ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆25Apr 13, 2020Updated 5 years ago
- taxonomic classes for Python☆11Aug 30, 2021Updated 4 years ago
- Assembly statistic visualisation☆95Dec 22, 2023Updated 2 years ago
- A visualization tool for Systems-Level Interactive Data Exploration☆12Jan 12, 2022Updated 4 years ago
- Visualize whole genome alignments as linear maps☆74Jan 21, 2026Updated 2 months ago
- A Swiss-Army-Knife for Bioinformaticians☆14Mar 3, 2026Updated 2 weeks ago
- a command line tool for viral proteomic tree generation, part of the ViPTree project: http://www.genome.jp/viptree☆35Sep 20, 2022Updated 3 years ago
- Automatically exported from code.google.com/p/densitree☆29Jul 27, 2025Updated 7 months ago
- R script to generate high resolution image of ways to balance a centrifuge☆26Feb 17, 2019Updated 7 years ago
- Tutorials on how to use the microGVL to do common bacterial bioinformatic tasks☆25Jun 11, 2024Updated last year
- ☆22Mar 25, 2014Updated 11 years ago
- ☆10Mar 11, 2026Updated last week
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆71Mar 9, 2026Updated 2 weeks ago
- ☆13Mar 28, 2018Updated 7 years ago