Public Release of ProGen3 family of Models
☆114Jul 21, 2025Updated last year
Alternatives and similar repositories for progen3
Users that are interested in progen3 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆272Jul 24, 2025Updated last year
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆93Feb 3, 2025Updated last year
- Aligning protein generative models with experimental fitness☆143Mar 12, 2026Updated 5 months ago
- Adapting protein language models for structure-conditioned design☆42Aug 5, 2024Updated 2 years ago
- A partially latent flow matching model for the joint generation of a protein’s amino acid sequence and full atomistic structure, includin…☆309Sep 23, 2025Updated 11 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆64Apr 9, 2024Updated 2 years ago
- Profluent-E1 family of Protein Encoder Models☆115Mar 11, 2026Updated 5 months ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆149Nov 11, 2025Updated 9 months ago
- Official repository for the ProteinGym benchmarks☆467Mar 25, 2026Updated 5 months ago
- Diffusion-based all-atom protein generative model.☆238Aug 27, 2025Updated last year
- ☆145Jun 3, 2025Updated last year
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆126May 27, 2025Updated last year
- ☆43Jun 12, 2025Updated last year
- Implementation for SE(3) diffusion model with application to protein backbone generation☆423Jul 3, 2023Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆264Mar 26, 2026Updated 5 months ago
- ☆259Feb 12, 2026Updated 6 months ago
- The Family of Diffusion Protein Language Models (DPLM)☆343Jul 25, 2025Updated last year
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆332Oct 28, 2024Updated last year
- Potts model-based protein sequence design☆111Jul 1, 2026Updated last month
- ☆185Jul 24, 2026Updated last month
- ProTrek: illuminating the Protein Universe through Trimodal Protein Language Model (Connecting text and protein)☆215May 15, 2026Updated 3 months ago
- The first large protein language model trained follows structure instructions.☆101May 20, 2025Updated last year
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆72Aug 4, 2026Updated 3 weeks ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆627Feb 6, 2025Updated last year
- IntelliFold: A Controllable Foundation Model for General and Specialized Biomolecular Structure Prediction.☆228Jun 23, 2026Updated 2 months ago
- PLACER is graph neural network for local prediction of protein-ligand conformational ensembles.☆263Nov 5, 2025Updated 9 months ago
- Saprot: Protein Language Model with Structural Alphabet (AA+3Di)☆626Mar 8, 2026Updated 5 months ago
- Expert-Guided Protein Language Models enable Accurate and Blazingly Fast Fitness Prediction☆17Feb 6, 2026Updated 6 months ago
- A conditionally adapted protein language model for the generation of enzymes☆24Nov 26, 2024Updated last year
- RoseTTAFold2 protein/nucleic acid complex prediction☆380Jun 3, 2024Updated 2 years ago
- Structure-conditioned masked language modeling for protein sequence design☆74Jan 31, 2024Updated 2 years ago
- A standardized protein design benchmark for motif-scaffolding problems☆84Updated this week
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆115Jul 20, 2026Updated last month
- ☆78May 4, 2026Updated 3 months ago
- ☆101Jul 9, 2026Updated last month
- Making Protein Language Modeling Accessible to All Biologists☆169Updated this week
- Inference code for RFdiffusion2☆440Apr 3, 2026Updated 4 months ago
- LatentDE: Latent-based Directed Evolution for Protein Sequence Design☆38Apr 2, 2025Updated last year
- Official Implementation of IgGM☆222May 28, 2026Updated 3 months ago