Alternatives and similar repositories for VespaG

Users that are interested in VespaG are comparing it to the libraries listed below

• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆40Updated last month
• the-protein-engineering-tournament / pet-pilot-2023
  Results and data from the pilot round of the Protein Engineering Tournament
  ☆29Updated 2 months ago
• luo-group / ConFit
  Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape
  ☆29Updated 9 months ago
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆69Updated 4 months ago
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆41Updated last month
• coreyhowe999 / RSO
  ☆21Updated 7 months ago
• KULL-Centre / _2024_cagiada_stability
  ☆67Updated 2 months ago
• AbSciBio / igdesign
  ☆40Updated 4 months ago
• TviNet / NetSolP-1.0
  Predicts the solubility and usability for purification of proteins expressed in E. coli using protein language models
  ☆35Updated 5 months ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆35Updated 8 months ago
• SNU-CSSB / RF2-Lite
  ☆30Updated last year
• bwicky / oligomer_hallucination
  ☆35Updated last year
• wells-wood-research / PDBench
  PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.
  ☆29Updated 2 years ago
• petergroth / kermut
  This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …
  ☆25Updated 6 months ago
• Rocklin-Lab / cdna-display-proteolysis-pipeline
  ☆25Updated 2 years ago
• sokrypton / ColabBio
  random colab notebooks for biology
  ☆26Updated 2 months ago
• OpenProteinAI / PoET
  Inference code for PoET: A generative model of protein families as sequences-of-sequences
  ☆72Updated last year
• psipred / ted-tools
  ML toolset for creating TED: The Encyclopedia of Domains
  ☆21Updated last week
• danny305 / StabilityOracle
  ☆25Updated 11 months ago
• PKUliujl / GeoSeqBuilder
  ☆27Updated 4 months ago
• HySonLab / Directed_Evolution
  Protein Design by Machine Learning guided Directed Evolution
  ☆41Updated 2 months ago
• daisybio / data-leakage-ppi-prediction
  Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'
  ☆24Updated last year
• adaptyvbio / competition_metrics
  Metrics for our protein design competitions.
  ☆30Updated 7 months ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆57Updated 6 months ago
• epicrispr-biotechnologies / evolutionary_monte_carlo_search
  Implementation of Evolutionary and Metropolis Hastings Monte Carlo for text based (e.g. nucleotide/peptide) sequences
  ☆11Updated last year
• TobiasHeOl / AbLang2
  An antibody-specific language model focusing on NGL prediction
  ☆17Updated 2 months ago
• Kuhlman-Lab / alphafold3
  Kuhlman Lab Installation of AlphaFold3
  ☆26Updated 3 weeks ago
• bene837 / af2seq
  ☆43Updated 8 months ago
• petergroth / FLOP
  This is the official code repository for the paper FLOP: Tasks for Fitness Landscapes Of Protein wildtypes by Groth et al.
  ☆22Updated last year
• chloechsu / combining-evolutionary-and-assay-labelled-data
  ☆62Updated 3 years ago