JSchlensok / VespaGView external linksLinks
Expert-Guided Protein Language Models enable Accurate and Blazingly Fast Fitness Prediction
☆15Feb 6, 2026Updated last week
Alternatives and similar repositories for VespaG
Users that are interested in VespaG are comparing it to the libraries listed below
Sorting:
- Sequences from Adaptyv Bio’s EGFR Protein Design Competition☆15Aug 28, 2025Updated 5 months ago
- ☆17Jun 27, 2025Updated 7 months ago
- A neural based approach to the task of genetic codon optimization☆18Aug 17, 2020Updated 5 years ago
- A conditionally adapted protein language model for the generation of enzymes☆23Nov 26, 2024Updated last year
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆93Apr 24, 2024Updated last year
- A collection of software for protein structure prediction and design☆39Dec 16, 2024Updated last year
- Some scoring functions for predicting the effects of mutations on protein sequences using ESM-2☆11Dec 10, 2023Updated 2 years ago
- Public Release of ProGen3 family of Models☆100Jul 21, 2025Updated 6 months ago
- 🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…☆82May 16, 2025Updated 9 months ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆127Nov 19, 2025Updated 2 months ago
- A simple but powerful VSCode extension for visualizing protein structures using the Molstar framework.☆34Oct 17, 2025Updated 4 months ago
- ☆15Mar 28, 2025Updated 10 months ago
- Lbster: Language models for Biological Sequence Transformation and Evolutionary Representation☆146Jan 31, 2026Updated 2 weeks ago
- This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …☆42Aug 5, 2025Updated 6 months ago
- Code for NeurIPS 2024 paper "A SARS-CoV-2 Interaction Dataset and VHH Sequence Corpus for Antibody Language Models"☆14Oct 17, 2024Updated last year
- ☆58Nov 7, 2025Updated 3 months ago
- ☆17Dec 9, 2024Updated last year
- Code for RL-DIF☆16Jun 24, 2025Updated 7 months ago
- ☆20Aug 25, 2025Updated 5 months ago
- ☆16Feb 14, 2025Updated last year
- Open source code for AlphaFold.☆18Jun 9, 2024Updated last year
- This is the official code repository for the paper FLOP: Tasks for Fitness Landscapes Of Protein wildtypes by Groth et al.☆22Jun 26, 2023Updated 2 years ago
- Making Protein Language Modeling Accessible to All Biologists☆148Feb 9, 2026Updated last week
- Steering discrete diffusion models with labeled data for protein fitness optimization☆28Nov 1, 2025Updated 3 months ago
- Code for AlphaFold Distillation for Protein Design☆25Sep 18, 2025Updated 5 months ago
- ☆23Jun 10, 2025Updated 8 months ago
- FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models☆163Jul 30, 2025Updated 6 months ago
- VenusFSFP: Few-Shot Protein Fitness Prediction☆106Nov 18, 2025Updated 3 months ago
- P450Diffusion: A tool for designing P450 sequences based on diffusion model☆26Jul 16, 2024Updated last year
- Official repository of EnzymeFlow☆98Dec 7, 2024Updated last year
- workflow used to prepare PPB-Affinity database☆28Aug 22, 2024Updated last year
- ☆24Dec 2, 2024Updated last year
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆120May 27, 2025Updated 8 months ago
- Evolutionary Algorithm with Diffusion Models for Protein Design☆30Jan 7, 2026Updated last month
- 🎈 Structure-aware adapter fine-tuning PLMs, with high training speed and impressive performance (Journal of Chemical Information and Mod…☆25May 16, 2025Updated 9 months ago
- ☆32Feb 10, 2026Updated last week
- BioLiP2 database curation and web interface☆29Jun 19, 2025Updated 7 months ago
- ☆21Oct 26, 2024Updated last year
- A generalized enzyme kinetics parameter prediction model.☆74Oct 2, 2025Updated 4 months ago