Alternatives and similar repositories for VespaG

Users that are interested in VespaG are comparing it to the libraries listed below

• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆70Updated 2 months ago
• the-protein-engineering-tournament / pet-pilot-2023
  Results and data from the pilot round of the Protein Engineering Tournament
  ☆30Updated 5 months ago
• KULL-Centre / _2024_cagiada_stability
  ☆70Updated 5 months ago
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆51Updated last month
• OpenProteinAI / PoET
  Inference code for PoET: A generative model of protein families as sequences-of-sequences
  ☆79Updated last year
• yoakiyama / MSA_Pairformer
  ☆76Updated last week
• bwicky / oligomer_hallucination
  ☆36Updated last year
• flyark / AFM-LIS
  Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)
  ☆58Updated 5 months ago
• luo-group / ConFit
  Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape
  ☆31Updated last year
• HySonLab / Directed_Evolution
  Protein Design by Machine Learning guided Directed Evolution
  ☆44Updated 5 months ago
• AbSciBio / igdesign
  ☆45Updated 7 months ago
• petergroth / kermut
  This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …
  ☆32Updated last month
• wells-wood-research / PDBench
  PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.
  ☆30Updated 2 years ago
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆44Updated 4 months ago
• Rocklin-Lab / cdna-display-proteolysis-pipeline
  ☆25Updated 2 years ago
• kWeissenow / EMBER3D
  Ultra-fast in-silico structure mutation
  ☆34Updated 4 months ago
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆41Updated 3 months ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆65Updated 9 months ago
• steineggerlab / folddisco
  Fast indexing and search of discontinuous motifs in protein structures
  ☆76Updated 2 weeks ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆38Updated 11 months ago
• uci-cbcl / esm-efficient
  Efficient implementatin of ESM family.
  ☆69Updated 2 weeks ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆51Updated 3 months ago
• OATML-Markslab / ProteinNPT
  Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"
  ☆117Updated 5 months ago
• coreyhowe999 / RSO
  ☆21Updated 10 months ago
• adaptyvbio / competition_metrics
  Metrics for our protein design competitions.
  ☆35Updated 10 months ago
• idmjky / EvolvePro
  PLM based active learning model for protein engineering
  ☆82Updated last year
• jonfunk21 / ProteusAI
  ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…
  ☆62Updated 6 months ago
• rohitsinghlab / raygun
  Template-based protein design with Raygun
  ☆72Updated last month
• lehner-lab / MoCHI
  Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…
  ☆53Updated 4 months ago
• teevee112 / NetSolP-1.0
  Predicts the solubility and usability for purification of proteins expressed in E. coli using protein language models
  ☆38Updated 8 months ago