Alternatives and similar repositories for ProSST:

Users that are interested in ProSST are comparing it to the libraries listed below

• zhanghaicang / carbonmatrix_public
  ☆111Updated last week
• ai4protein / Pro-FSFP
  Pro-FSFP: Few-Shot Protein Fitness Prediction
  ☆80Updated 3 months ago
• levinthal / Pallatom
  ☆92Updated 6 months ago
• DeepGraphLearning / ESM-GearNet
  ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)
  ☆93Updated last year
• Kuhlman-Lab / ThermoMPNN
  GNN trained to predict changes in thermodynamic stability for protein point mutants
  ☆164Updated 2 months ago
• ai4protein / VenusFactory
  🏭 Easy data acquisition, benchmark resources, PLM fine-tuning for bio-researchers.
  ☆81Updated last week
• THUNLP-MT / dyMEAN
  This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"
  ☆104Updated 2 months ago
• westlake-repl / SaprotHub
  Making Protein Modeling Accessible to All Biologists
  ☆110Updated last week
• WillHua127 / EnzymeFlow
  Official repository of EnzymeFlow
  ☆88Updated 4 months ago
• OATML-Markslab / ProteinNPT
  Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"
  ☆112Updated last month
• TencentAI4S / tfold
  open source code for Tencent tFold
  ☆97Updated last month
• ai4protein / Pro-Prime
  ☆55Updated 3 months ago
• zaixizhang / PocketGen
  PocketGen (Nature Machine Intelligence 24): Generating Full-Atom Ligand-Binding Protein Pockets
  ☆177Updated 3 weeks ago
• hefeda / design_tools
  A compilation of deep learning methods for protein design
  ☆97Updated 2 years ago
• westlake-repl / ProTrek
  ProTrek: Navigating the Protein Universe through Tri-Modal Contrastive Learning
  ☆101Updated this week
• BytedProtein / ByProt
  ☆185Updated 7 months ago
• RSchmirler / data-repo_plm-finetune-eval
  Data repository for "Fine-tuning protein language models boosts predictions across diverse tasks"
  ☆37Updated 8 months ago
• Graylab / FLAb
  Fitness landscapes for antibodies
  ☆68Updated 3 months ago
• varun-shanker / structural-evolution
  ☆104Updated 9 months ago
• ikalvet / heme_binder_diffusion
  ☆122Updated 6 months ago
• ai4protein / VenusREM
  🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)
  ☆57Updated 2 weeks ago
• wenjiegroup / ProMEP
  Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning
  ☆59Updated 10 months ago
• wengong-jin / abdockgen
  ☆106Updated 2 years ago
• richardshuai / fampnn
  Sidechain conditioning and modeling for full-atom protein sequence design
  ☆95Updated 2 months ago
• Graylab / IgLM
  Generative Language Modeling for Antibody Design
  ☆148Updated 7 months ago
• AstraZeneca / DiffAbXL
  The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…
  ☆70Updated 6 months ago
• Luo-SynBioLab / UniKP
  ☆70Updated last year
• LPDI-EPFL / masif-neosurf
  MaSIF-neosurf: surface-based protein design for ternary complexes.
  ☆113Updated last month
• evo-design / protein-dpo
  Aligning protein generative models with experimental fitness
  ☆92Updated 6 months ago
• LPDI-EPFL / masif_seed
  Masif seed paper repository
  ☆150Updated last year