Eikor / InstructPLM

Related projects ⓘ

Alternatives and complementary repositories for InstructPLM

• THUNLP-MT / dyMEAN
  This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"
  ☆93Updated 6 months ago
• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆51Updated last year
• Graylab / IgLM
  Generative Language Modeling for Antibody Design
  ☆128Updated last month
• OATML-Markslab / ProteinNPT
  Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"
  ☆80Updated this week
• ai4protein / Pro-FSFP
  Pro-FSFP: Few-Shot Protein Fitness Prediction
  ☆54Updated 2 months ago
• stebliankin / piston
  Evaluating Protein Binding Interfaces with Transformer Networks
  ☆40Updated last year
• TencentAI4S / tfold
  open source code for Tencent tFold
  ☆67Updated 5 months ago
• westlake-repl / ProTrek
  ProTrek: Navigating the Protein Universe through Tri-Modal Contrastive Learning
  ☆50Updated last week
• varun-shanker / structural-evolution
  ☆80Updated 3 months ago
• Liuxg16 / GeoPPI
  ☆75Updated 2 years ago
• biomed-AI / GraphSite
  GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures
  ☆56Updated 3 months ago
• WillHua127 / EnzymeFlow
  EnzymeFlow official.
  ☆50Updated last week
• anton-bushuiev / PPIRef
  Dataset and package for working with protein-protein interactions in 3D
  ☆83Updated 2 weeks ago
• elttaes / Revisiting-PLMs
  Exploring Evolution-aware & free protein language models as protein function predictors
  ☆60Updated last month
• westlake-repl / SaprotHub
  SaprotHub: Making Protein Modeling Accessible to All Biologists
  ☆66Updated this week
• hugohrban / ProGen2-finetuning
  Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.
  ☆30Updated 2 months ago
• BioinfoMachineLearning / PoseBench
  Comprehensive benchmarking of protein-ligand structure generation methods (ICML 2024 AI4Science)
  ☆79Updated 2 weeks ago
• EDAPINENUT / GeoAB
  This is the official repository of paper - GeoAB: Towards Realistic Antibody Design and Reliable Affinity Maturation (ICML2024)
  ☆33Updated 4 months ago
• THUDM / MSAGPT
  MSAGPT
  ☆25Updated 4 months ago
• zhengkangjie / ESM-AA
  ☆56Updated 4 months ago
• luost26 / RDE-PPI
  Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)
  ☆52Updated 4 months ago
• LPDI-EPFL / masif_seed
  Masif seed paper repository
  ☆135Updated last year
• WeiLab-Biology / DeepProSite
  ☆26Updated 10 months ago
• Immortals-33 / Scaffold-Lab
  A comprehensive benchmark on the performances of multiple protein backbone generative models.
  ☆31Updated this week
• BytedProtein / ByProt
  ☆158Updated last month
• DeepGraphLearning / ESM-GearNet
  ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)
  ☆79Updated last year
• AlexanderKroll / ESP
  ☆64Updated last month
• zaixizhang / PocketGen
  Implementation of PocketGen: Generating Full-Atom Ligand-Binding Protein Pockets
  ☆86Updated last month
• HeliXonProtein / binding-ddg-predictor
  open source repository
  ☆124Updated 11 months ago
• levinthal / Pallatom
  ☆65Updated last week