Alternatives and similar repositories for EnzyGen:

Users that are interested in EnzyGen are comparing it to the libraries listed below

• WillHua127 / GENzyme
  Official repository of GENzyme
  ☆46Updated 4 months ago
• LBM-EPFL / CARBonAra
  Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…
  ☆39Updated 4 months ago
• HannesStark / CodonMPNN
  ☆27Updated 4 months ago
• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆32Updated 5 months ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆45Updated 4 months ago
• anirudhvenk / antibody-dpo
  ☆19Updated 3 months ago
• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆57Updated last year
• meilerlab / HyperMPNN
  HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles
  ☆53Updated last month
• bzho3923 / CPDiffusion
  ☆23Updated 6 months ago
• EureKaZhu / DiffAffinity
  Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)
  ☆34Updated last year
• Junjie-Zhu / IDPFold
  IDPFold test version
  ☆19Updated 7 months ago
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆39Updated 4 months ago
• AstraZeneca / DiffAbXL
  The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…
  ☆68Updated 5 months ago
• stebliankin / piston
  Evaluating Protein Binding Interfaces with Transformer Networks
  ☆45Updated last year
• mjendrusch / salad
  protein structure generation with sparse all-atom denoising models
  ☆30Updated 2 months ago
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆32Updated last month
• danny305 / StabilityOracle
  ☆24Updated 9 months ago
• GMdSilva / gms_natcomms_1705932980_data
  Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2
  ☆39Updated 10 months ago
• iambic-therapeutics / np-bench
  A benchmark for 3D biomolecular structure prediction models
  ☆56Updated 3 months ago
• skalyaanamoorthy / PSLMs
  ☆18Updated 5 months ago
• ohuelab / Solubility_AfDesign
  Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol
  ☆31Updated last year
• liuyf020419 / SCUBA-D
  ☆58Updated last year
• sirius777coder / GPDL
  Generative diverse protein backbones by protein language model
  ☆31Updated 4 months ago
• wangxr0526 / EasIFA
  Code of “Multi-Modal Deep Learning Enables Ultrafast and Accurate Annotation of Enzymatic Active Sites”
  ☆31Updated last month
• bene837 / af2seq
  ☆43Updated 6 months ago
• DeepGraphLearning / S3F
  Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)
  ☆30Updated 4 months ago
• LongxingCao / pymol_scripts
  bakerlab pymol scripts
  ☆21Updated 5 years ago
• richardshuai / fampnn
  Sidechain conditioning and modeling for full-atom protein sequence design
  ☆88Updated last month
• compsciencelab / mdCATH
  This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…
  ☆40Updated 4 months ago
• Gonglab-THU / GeoStab
  ☆31Updated 5 months ago