☆39Jun 12, 2025Updated 8 months ago
Alternatives and similar repositories for EnzyGen
Users that are interested in EnzyGen are comparing it to the libraries listed below
Sorting:
- Protein representation and design under a single training scheme☆24Updated this week
- Implementation of NeurIPS24 paper "Generalized Protein Pocket Generation with Prior-Informed Flow Matching"☆19May 15, 2025Updated 9 months ago
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆23Mar 6, 2025Updated 11 months ago
- Official repository of EnzymeFlow☆98Dec 7, 2024Updated last year
- Official repository of ReactZyme☆40Oct 12, 2024Updated last year
- ☆65Apr 8, 2025Updated 10 months ago
- Official repository of GENzyme☆61Nov 29, 2024Updated last year
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆65Feb 2, 2026Updated 3 weeks ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆36Nov 5, 2025Updated 3 months ago
- ProteinReDiff: Complex-based ligand-binding proteins redesign by equivariant diffusion-based generative models☆39Nov 25, 2024Updated last year
- ☆31Dec 12, 2024Updated last year
- Adapting protein language models for structure-conditioned design☆40Aug 5, 2024Updated last year
- ☆35Mar 19, 2025Updated 11 months ago
- Fold Conditioned protein design pipeline based on AF2Multimer Hallucination☆50Dec 2, 2025Updated 2 months ago
- 🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)☆122Feb 7, 2026Updated 3 weeks ago
- Public Release of ProGen3 family of Models☆100Jul 21, 2025Updated 7 months ago
- [ICML 2024] Floating Anchor Diffusion Model for Multi-motif Scaffolding☆31Aug 23, 2024Updated last year
- A standardized protein design benchmark for motif-scaffolding problems☆75Jan 27, 2026Updated last month
- [ICLR 2024 Spotlight] The official repo for the paper "De novo Protein Design using Geometric Vector Field Networks".☆30Aug 23, 2024Updated last year
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆73Jul 2, 2025Updated 7 months ago
- This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …☆42Aug 5, 2025Updated 6 months ago
- Modelling protein conformational landscape with Alphafold☆55Aug 29, 2025Updated 6 months ago
- ☆24Dec 2, 2024Updated last year
- Graphormer Based Protein Sequence Design☆26Feb 2, 2024Updated 2 years ago
- code and source data for de novo design of Kemp elimination paper☆24Sep 18, 2025Updated 5 months ago
- Aligning protein generative models with experimental fitness☆118Oct 16, 2025Updated 4 months ago
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆85Jun 23, 2024Updated last year
- No description yet.☆17Aug 8, 2024Updated last year
- AlphaFold version that is extended to integrate diversity parameters for massive sampling.☆16Feb 13, 2026Updated 2 weeks ago
- ☆40Jul 28, 2025Updated 7 months ago
- ☆128Feb 9, 2026Updated 2 weeks ago
- Generative diverse protein backbones by protein language model☆34Oct 30, 2025Updated 4 months ago
- NeurIPS 2023 Spotlight paper: Full atom protein pocket design via iterative refinement☆47Oct 28, 2023Updated 2 years ago
- Diffusion-based all-atom protein generative model.☆232Aug 27, 2025Updated 6 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆47Nov 4, 2025Updated 3 months ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆226Aug 7, 2025Updated 6 months ago
- Machine learning prediction of enzyme optimum pH☆23Apr 29, 2025Updated 10 months ago
- ☆23Jan 15, 2026Updated last month
- ☆65Sep 14, 2023Updated 2 years ago