Alternatives and similar repositories for EnzyGen:

Users that are interested in EnzyGen are comparing it to the libraries listed below

• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆39Updated last month
• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆54Updated last year
• WillHua127 / GENzyme
  Official repository of GENzyme
  ☆40Updated last month
• LBM-EPFL / CARBonAra
  Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…
  ☆35Updated last month
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆34Updated last month
• WillHua127 / EnzymeFlow
  Official repository of EnzymeFlow
  ☆72Updated last month
• HannesStark / CodonMPNN
  ☆24Updated last month
• compsciencelab / mdCATH
  This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…
  ☆31Updated 2 months ago
• BioinfoMachineLearning / FlowDock
  Geometric Flow Matching for Generative Protein-Ligand Docking and Affinity Prediction (CASP16)
  ☆60Updated this week
• ohuelab / ColabDesign-cyclic-binder
  ☆29Updated last year
• pgmikhael / clipzyme
  Reaction-Conditioned Virtual Screening of Enzymes
  ☆25Updated last month
• huhlim / alphafold-multistate
  ☆33Updated 9 months ago
• luo-group / MODIFY
  ML-optimized library design with improved fitness and diversity for protein engineering
  ☆27Updated 5 months ago
• leeyang / DRfold
  ☆33Updated last year
• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆30Updated 2 months ago
• WillHua127 / ReactZyme
  Official repository of ReactZyme
  ☆24Updated 3 months ago
• GMdSilva / gms_natcomms_1705932980_data
  Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2
  ☆38Updated 8 months ago
• AspirinCode / AlphaPPImd
  Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks
  ☆27Updated 7 months ago
• stebliankin / piston
  Evaluating Protein Binding Interfaces with Transformer Networks
  ☆40Updated last year
• LDeng0205 / confidence-bootstrapping
  Implementation of the Confidence Bootstrapping procedure for protein-ligand docking.
  ☆26Updated 10 months ago
• LPDI-EPFL / masif-neosurf
  MaSIF-neosurf: surface-based protein design for ternary complexes.
  ☆53Updated this week
• wengong-jin / DSMBind
  ☆79Updated 3 months ago
• PKUliujl / GeoSeqBuilder
  ☆24Updated this week
• Barabasi-Lab / AI-Bind
  Interpretable AI pipeline improving binding predictions for novel protein targets and ligands
  ☆37Updated 8 months ago
• skalyaanamoorthy / PSLMs
  ☆15Updated 2 months ago
• sokrypton / af2bind
  ☆44Updated 2 weeks ago
• iambic-therapeutics / np-bench
  A benchmark for 3D biomolecular structure prediction models
  ☆52Updated last month
• anton-bushuiev / PPIformer
  Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)
  ☆47Updated this week
• liuyf020419 / SCUBA-D
  ☆51Updated 9 months ago