Implementation for SE(3) diffusion model with application to protein backbone generation
☆423Jul 3, 2023Updated 3 years ago
Alternatives and similar repositories for se3_diffusion
Users that are interested in se3_diffusion are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Fast protein backbone generation with SE(3) flow matching.☆326Jul 19, 2024Updated 2 years ago
- FoldFlow: SE(3)-Stochastic Flow Matching for Protein Backbone Generation☆299Dec 10, 2024Updated last year
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds☆189Apr 21, 2024Updated 2 years ago
- Code implementation of "Diffusion probabilistic modeling of protein backbones in 3D for the motif-scaffolding problem" https://arxiv.org/…☆73Aug 11, 2023Updated 3 years ago
- ☆232Mar 2, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Diffusion-based all-atom protein generative model.☆237Aug 27, 2025Updated 11 months ago
- EigenFold: Generative Protein Structure Prediction with Diffusion Models☆179Apr 6, 2023Updated 3 years ago
- AlphaFold Meets Flow Matching for Generating Protein Ensembles☆538Mar 22, 2026Updated 4 months ago
- Diffusion models of protein structure; trigonometry and attention are all you need!☆565Dec 12, 2023Updated 2 years ago
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆333Oct 28, 2024Updated last year
- A generative model for programmable protein design☆827Apr 11, 2024Updated 2 years ago
- ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)☆368Jun 29, 2023Updated 3 years ago
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆90Jun 23, 2024Updated 2 years ago
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆270Jul 24, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Public RFDiffusionAA repo☆483Jul 9, 2024Updated 2 years ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆146Nov 11, 2025Updated 9 months ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆194Jun 24, 2024Updated 2 years ago
- Implementation of the DDPM + IPA (invariant point attention) for protein generation, as outlined in the paper "Protein Structure and Sequ…☆89Jul 25, 2022Updated 4 years ago
- Generation of protein sequences and evolutionary alignments via discrete diffusion models☆678Jan 15, 2026Updated 6 months ago
- ☆64Sep 14, 2023Updated 2 years ago
- Protein Design with Guided Discrete Diffusion☆143Feb 21, 2024Updated 2 years ago
- Code for running RFdiffusion☆3,012Jul 15, 2026Updated 3 weeks ago
- Making Protein Design accessible to all via Google Colab!☆926Apr 6, 2026Updated 4 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆144Jun 3, 2025Updated last year
- ☆211Apr 21, 2025Updated last year
- ☆258Feb 12, 2026Updated 5 months ago
- List of papers about Proteins Design using Deep Learning☆1,957Aug 2, 2026Updated last week
- Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking☆1,562May 2, 2025Updated last year
- Code for the ProteinMPNN paper☆1,824Aug 14, 2024Updated last year
- A partially latent flow matching model for the joint generation of a protein’s amino acid sequence and full atomistic structure, includin…☆304Sep 23, 2025Updated 10 months ago
- Structure-conditioned masked language modeling for protein sequence design☆74Jan 31, 2024Updated 2 years ago
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆88Apr 21, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆815May 18, 2026Updated 2 months ago
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆72Aug 4, 2026Updated last week
- The Family of Diffusion Protein Language Models (DPLM)☆342Jul 25, 2025Updated last year
- ☆218Sep 24, 2024Updated last year
- ☆118Jan 3, 2026Updated 7 months ago
- Aligning protein generative models with experimental fitness☆124Mar 12, 2026Updated 5 months ago
- Implementation of Chroma, generative models of protein using DDPM and GNNs, in Pytorch☆159Dec 27, 2022Updated 3 years ago