drorlab / DIPSLinks
Database of Interacting Protein Structures (DIPS)
☆102Updated last year
Alternatives and similar repositories for DIPS
Users that are interested in DIPS are comparing it to the libraries listed below
Sorting:
- The Enhanced Database of Interacting Protein Structures for Interface Prediction☆50Updated last month
- Intrinsic-Extrinsic Convolution and Pooling for Learning on 3D Protein Structures☆48Updated 3 years ago
- ☆107Updated 2 years ago
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆49Updated 8 months ago
- A geometric deep learning framework (Geometric Transformers) for predicting protein interface contacts. (ICLR 2022)☆64Updated 3 years ago
- Geometric Vector Perceptron --- a rotation-equivariant GNN for learning from biomolecular structure☆153Updated 4 years ago
- A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design☆106Updated last year
- Implementation of DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing☆89Updated last year
- Official implementation of "Generating 3D Molecules for Target Protein Binding" [ICML2022 Long Presentation]☆109Updated 2 years ago
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆78Updated last year
- ☆41Updated 2 years ago
- open source repository☆141Updated last year
- Multi-Scale Representation Learning on Proteins (NeurIPS 2021)☆48Updated 2 years ago
- Official repository for discrete Walk-Jump Sampling (dWJS)☆58Updated last year
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆81Updated last year
- Code for our paper "Protein sequence design with a learned potential"☆80Updated 2 years ago
- LM-GVP: A Generalizable Deep Learning Framework for Protein Property Prediction from Sequence and Structure☆63Updated last year
- Antibody-Antigen Docking and Affinity Benchmark☆73Updated 4 years ago
- ☆130Updated 3 years ago
- Fusion models for Atomic and molecular STructures (FAST)☆92Updated 2 years ago
- ☆93Updated 11 months ago
- ☆78Updated last year
- Code for Fold2Seq paper from ICML 2021☆50Updated 3 years ago
- source code for https://arxiv.org/abs/2005.11248 "Accelerating Antimicrobial Discovery with Controllable Deep Generative Models and Molec…☆105Updated 2 weeks ago
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆98Updated last year
- Dataset and package for working with protein-protein interactions in 3D☆96Updated 5 months ago
- FrameDiPT: an SE(3) diffusion model for protein structure inpainting☆56Updated last year
- PyTorch implementation for our paper "Proximal Exploration for Model-guided Protein Sequence Design"☆37Updated 2 years ago
- Code for "Protein Docking Model Evaluation by Graph Neural Networks"☆59Updated 2 years ago
- ☆68Updated 3 years ago