drorlab / DIPSLinks
Database of Interacting Protein Structures (DIPS)
☆103Updated 2 years ago
Alternatives and similar repositories for DIPS
Users that are interested in DIPS are comparing it to the libraries listed below
Sorting:
- The Enhanced Database of Interacting Protein Structures for Interface Prediction☆53Updated 5 months ago
- ☆108Updated 2 years ago
- Implementation of DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing☆89Updated 2 years ago
- Intrinsic-Extrinsic Convolution and Pooling for Learning on 3D Protein Structures☆49Updated 4 years ago
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆52Updated last month
- A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design☆110Updated last year
- Antibody-Antigen Docking and Affinity Benchmark☆76Updated 5 years ago
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆81Updated last year
- A geometric deep learning framework (Geometric Transformers) for predicting protein interface contacts. (ICLR 2022)☆64Updated 3 years ago
- Code for "Protein Docking Model Evaluation by Graph Neural Networks"☆59Updated 2 years ago
- Multi-Scale Representation Learning on Proteins (NeurIPS 2021)☆49Updated 2 years ago
- ☆41Updated 2 years ago
- Geometric Vector Perceptron --- a rotation-equivariant GNN for learning from biomolecular structure☆162Updated 4 years ago
- open source repository☆145Updated 2 years ago
- source code for https://arxiv.org/abs/2005.11248 "Accelerating Antimicrobial Discovery with Controllable Deep Generative Models and Molec…☆110Updated 4 months ago
- ☆80Updated last year
- Official repository for discrete Walk-Jump Sampling (dWJS)☆58Updated last year
- LM-GVP: A Generalizable Deep Learning Framework for Protein Property Prediction from Sequence and Structure☆65Updated last year
- Official repository of EnzymeFlow☆98Updated last year
- ☆96Updated last year
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆98Updated last year
- Code for Fold2Seq paper from ICML 2021☆50Updated 3 years ago
- FrameDiPT: an SE(3) diffusion model for protein structure inpainting☆58Updated 2 years ago
- ☆114Updated 3 years ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆124Updated 11 months ago
- Official implementation of "Generating 3D Molecules for Target Protein Binding" [ICML2022 Long Presentation]☆111Updated 2 years ago
- ☆130Updated 3 years ago
- Code for our paper "Protein sequence design with a learned potential"☆81Updated 2 years ago
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆85Updated last year
- Dataset and package for working with protein-protein interactions in 3D☆104Updated 9 months ago