Alternatives and similar repositories for RoseTTAFold2:

Users that are interested in RoseTTAFold2 are comparing it to the libraries listed below

• bjornwallner / DockQ
  DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models
  ☆261Updated 2 months ago
• RosettaCommons / protein_generator
  Joint sequence and structure generation with RoseTTAFold sequence space diffusion
  ☆304Updated 4 months ago
• ProteinDesignLab / protpardelle
  Diffusion-based all-atom protein generative model.
  ☆183Updated last month
• RosettaCommons / RFDesign
  Protein hallucination and inpainting with RoseTTAFold
  ☆253Updated last year
• Kuhlman-Lab / ThermoMPNN
  GNN trained to predict changes in thermodynamic stability for protein point mutants
  ☆152Updated last month
• OATML-Markslab / ProteinGym
  Official repository for the ProteinGym benchmarks
  ☆285Updated last week
• ikalvet / heme_binder_diffusion
  ☆114Updated 5 months ago
• nrbennet / dl_binder_design
  ☆293Updated 7 months ago
• patrickbryant1 / Umol
  Protein-ligand structure prediction
  ☆212Updated 7 months ago
• JeffSHF / ColabDock
  Code for ColabDock paper
  ☆137Updated 5 months ago
• oxpig / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆132Updated last month
• rifdock / rifdock
  Rifdock Library for Conformational Search
  ☆152Updated 10 months ago
• phbradley / alphafold_finetune
  Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions
  ☆147Updated last year
• brianhie / efficient-evolution
  Efficient evolution from protein language models
  ☆192Updated last year
• hefeda / design_tools
  A compilation of deep learning methods for protein design
  ☆97Updated 2 years ago
• fhalab / MLDE
  A machine-learning package for navigating combinatorial protein fitness landscapes.
  ☆123Updated 3 years ago
• ProteinDesignLab / protein-design-tutorials
  Tutorials, cheat sheets, and other resources for computational methods for protein design.
  ☆110Updated last year
• dauparas / LigandMPNN
  ☆295Updated last month
• zaixizhang / PocketGen
  PocketGen (Nature Machine Intelligence 24): Generating Full-Atom Ligand-Binding Protein Pockets
  ☆173Updated last week
• gjoni / trDesign
  trRosetta for protein design
  ☆177Updated 3 years ago
• westlake-repl / SaprotHub
  Making Protein Modeling Accessible to All Biologists
  ☆102Updated this week
• steineggerlab / foldcomp
  Compressing protein structures effectively with torsion angles
  ☆170Updated 7 months ago
• zrqiao / NeuralPLexer
  NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model
  ☆282Updated 11 months ago
• uw-ipd / RoseTTAFold2NA
  RoseTTAFold2 protein/nucleic acid complex prediction
  ☆353Updated 9 months ago
• HWaymentSteele / AF_Cluster
  Predict multiple protein conformations using sequence clustering and AlphaFold2.
  ☆149Updated 3 weeks ago
• zhanghaicang / carbonmatrix_public
  ☆110Updated last week
• mat10d / EvolvePro
  This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-sho…
  ☆217Updated last month
• RosettaCommons / DeepAb
  Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.
  ☆159Updated 2 years ago
• adaptyvbio / ProteinFlow
  Versatile computational pipeline for processing protein structure data for deep learning applications.
  ☆252Updated last year