liuyf020419 / SCUBA-D
☆43Updated 7 months ago
Related projects ⓘ
Alternatives and complementary repositories for SCUBA-D
- Code for humanization of antibody and nanobody☆23Updated 3 weeks ago
- ☆70Updated 7 months ago
- Evaluating Protein Binding Interfaces with Transformer Networks☆40Updated last year
- Pro-FSFP: Few-Shot Protein Fitness Prediction☆61Updated 2 months ago
- ☆20Updated last month
- Graphormer Based Protein Sequence Design☆24Updated 9 months ago
- ☆38Updated 2 months ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆51Updated last year
- ☆21Updated 5 months ago
- ☆46Updated 5 months ago
- ☆30Updated last year
- Official repository of EnzymeFlow☆59Updated last week
- AlphaFold-initiated replica exchange protein docking☆45Updated 3 months ago
- open source code for Tencent tFold☆68Updated 6 months ago
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆43Updated last week
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆37Updated 6 months ago
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆70Updated 5 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆34Updated 4 months ago
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆26Updated 2 weeks ago
- ☆66Updated 3 weeks ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆33Updated 2 months ago
- Code of “Multi-Modal Deep Learning Enables Ultrafast and Accurate Annotation of Enzymatic Active Sites”☆19Updated this week
- This repository implements Gibbs sampling with Graph-based Smoothing☆36Updated 5 months ago
- Fitness landscapes for antibodies☆51Updated 7 months ago
- ☆42Updated 4 months ago
- ☆96Updated last month
- ☆25Updated 3 months ago
- code for SeqDance, a biophysics-informed protein language model☆19Updated last month
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆29Updated last year
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆25Updated 2 months ago