Alternatives and similar repositories for SCUBA-D:

Users that are interested in SCUBA-D are comparing it to the libraries listed below

• bene837 / af2seq
  ☆43Updated 6 months ago
• Kuhlman-Lab / evopro
  ☆74Updated last week
• meilerlab / HyperMPNN
  HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles
  ☆51Updated last month
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆37Updated 3 months ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆51Updated last month
• WillHua127 / GENzyme
  Official repository of GENzyme
  ☆45Updated 3 months ago
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆28Updated last week
• decodermu / GPD
  Graphormer Based Protein Sequence Design
  ☆24Updated last year
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆52Updated 4 months ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆42Updated 3 months ago
• AspirinCode / AlphaPPImd
  Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks
  ☆27Updated 9 months ago
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆34Updated 3 months ago
• bigict / ProDESIGN-LE
  An accurate and efficient protein sequence design approach
  ☆24Updated last week
• ohuelab / Solubility_AfDesign
  Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol
  ☆31Updated last year
• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆32Updated 4 months ago
• idlutz / protein-backbone-MCTS
  ☆47Updated 9 months ago
• sokrypton / af2bind
  ☆49Updated this week
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆41Updated 4 months ago
• ohuelab / ColabFold-cycpep-dock
  Making Protein folding accessible to all!
  ☆21Updated last year
• Gonglab-THU / GeoStab
  ☆30Updated 5 months ago
• danny305 / StabilityOracle
  ☆24Updated 8 months ago
• GMdSilva / gms_natcomms_1705932980_data
  Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2
  ☆39Updated 10 months ago
• WeiLab-Biology / DeepProSite
  ☆31Updated last year
• leeyang / DRfold
  ☆35Updated last year
• DeepGraphLearning / S3F
  Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)
  ☆30Updated 3 months ago
• LBM-EPFL / CARBonAra
  Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…
  ☆38Updated 3 months ago
• skalyaanamoorthy / PSLMs
  ☆18Updated 4 months ago
• PKUliujl / GeoSeqBuilder
  ☆25Updated last month