☆644Feb 6, 2025Updated last year
Alternatives and similar repositories for LigandMPNN
Users that are interested in LigandMPNN are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Inference code for RFdiffusion2☆448Apr 3, 2026Updated 6 months ago
- Code for the ProteinMPNN paper☆1,873Aug 14, 2024Updated 2 years ago
- Public RFDiffusionAA repo☆490Jul 9, 2024Updated 2 years ago
- PLACER is graph neural network for local prediction of protein-ligand conformational ensembles.☆268Nov 5, 2025Updated 11 months ago
- ☆150Jul 16, 2025Updated last year
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- User friendly and accurate binder design pipeline☆1,246Sep 21, 2026Updated 3 weeks ago
- ☆258Sep 22, 2026Updated 3 weeks ago
- Central repository for biomolecular foundation models with shared trainers and pipeline components☆991Updated this week
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆276Sep 9, 2026Updated last month
- Code for running RFdiffusion☆3,085Jul 15, 2026Updated 2 months ago
- ☆419Aug 7, 2024Updated 2 years ago
- ☆826May 18, 2026Updated 4 months ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆151Nov 11, 2025Updated 11 months ago
- Making Protein Design accessible to all via Google Colab!☆947Aug 28, 2026Updated last month
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆80May 4, 2026Updated 5 months ago
- A generalized computational framework for biomolecular modeling.☆450Updated this week
- BoltzGen: Toward Universal Binder Design☆1,077Oct 6, 2026Updated last week
- Toward High-Accuracy Open-Source Biomolecular Structure Prediction.☆2,069Sep 21, 2026Updated 3 weeks ago
- Official repository for the Boltz biomolecular interaction models☆4,245May 29, 2026Updated 4 months ago
- Inference code for scalable emulation of protein equilibrium ensembles with generative deep learning☆888Updated this week
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆90Jul 2, 2025Updated last year
- HalluDesign, a hallucination-driven all-atom framework for the iterative co-optimization and co-design of protein sequences and structure…☆93Sep 30, 2026Updated 2 weeks ago
- Diffusion-based all-atom protein generative model.☆239Aug 27, 2025Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- AlphaFold Meets Flow Matching for Generating Protein Ensembles☆547Mar 22, 2026Updated 6 months ago
- Official repository of PXDesign☆267Dec 31, 2025Updated 9 months ago
- A generative model for programmable protein design☆834Updated this week
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆96Jul 31, 2026Updated 2 months ago
- Extension of ThermoMPNN for double mutant predictions☆66Mar 23, 2026Updated 6 months ago
- In silico directed evolution of peptide binders with AlphaFold☆280Sep 25, 2026Updated 2 weeks ago
- List of papers about Proteins Design using Deep Learning☆1,980Aug 15, 2026Updated last month
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆138Oct 30, 2025Updated 11 months ago
- Generative model for protein binder design for protein and small molecule targets. Combines a pretrained flow-based generative model (bui…☆453Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆332Oct 28, 2024Updated last year
- The Rosetta Bio-macromolecule modeling package. Available through license with the University of Washington.☆474Sep 24, 2026Updated 2 weeks ago
- ☆87Mar 23, 2026Updated 6 months ago
- ☆539Sep 23, 2026Updated 2 weeks ago
- Chai-1, SOTA model for biomolecular structure prediction☆2,002Jun 30, 2026Updated 3 months ago
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆278Jul 24, 2025Updated last year
- composite-objective protein design☆375Oct 6, 2026Updated last week