Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.
☆14Nov 14, 2025Updated 6 months ago
Alternatives and similar repositories for parametric_barrels
Users that are interested in parametric_barrels are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆16Mar 28, 2025Updated last year
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆90Jun 23, 2024Updated last year
- Code release for "Improving diffusion-based protein backbone generation with global-geometry-aware latent encoding"☆48Aug 5, 2025Updated 9 months ago
- A conditionally adapted protein language model for the generation of enzymes☆24Nov 26, 2024Updated last year
- This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.☆15Jul 25, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Protein representation and design under a single training scheme☆24May 17, 2026Updated last week
- [ICML 2024] Floating Anchor Diffusion Model for Multi-motif Scaffolding☆34Aug 23, 2024Updated last year
- Code supporting the Protein Design Archive (PDA) database publication☆16May 6, 2026Updated 2 weeks ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆138Nov 11, 2025Updated 6 months ago
- ☆52Apr 22, 2026Updated last month
- Deep learning + physical modeling for 3D protein metal ion binding prediction☆14Feb 24, 2025Updated last year
- Homomer symmetry prediction from protein sequence☆44Mar 13, 2025Updated last year
- Molecular dynamics without molecules: searching the conformational space of proteins with generative neural networks☆11Jun 13, 2022Updated 3 years ago
- ☆17Mar 26, 2024Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆47Sep 16, 2024Updated last year
- NeurIPS 2023 Spotlight paper: Full atom protein pocket design via iterative refinement☆48Oct 28, 2023Updated 2 years ago
- Utility for building inverse rotamer assemblies out of a Rosetta matcher/enzdes constraint file.☆27Mar 8, 2025Updated last year
- ML-guided enzyme engineering☆83Apr 13, 2026Updated last month
- Foldy: a web-based platform for interactive protein structure analysis☆29Oct 28, 2025Updated 6 months ago
- ☆15Jun 3, 2025Updated 11 months ago
- ☆18Aug 28, 2023Updated 2 years ago
- ☆59Jul 22, 2025Updated 10 months ago
- Fast protein structure searching or your money back☆119Apr 13, 2026Updated last month
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆192Jun 24, 2024Updated last year
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆75Jul 2, 2025Updated 10 months ago
- A python implementation of pdb2oniom for QM/MM (ONIOM) calculations☆12Oct 2, 2025Updated 7 months ago
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆174Feb 6, 2026Updated 3 months ago
- Code for RL-DIF☆16Jun 24, 2025Updated 11 months ago
- In-silico design pipeline for evaluating protein structure diffusion models.☆31Jun 25, 2024Updated last year
- our in-house version of ProteinMPNN☆39Feb 12, 2026Updated 3 months ago
- ☆55Mar 12, 2026Updated 2 months ago
- Public Release of ProGen3 family of Models☆109Jul 21, 2025Updated 10 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆26Oct 8, 2024Updated last year
- Metal and Water prediction☆14Feb 5, 2025Updated last year
- ☆33Feb 5, 2025Updated last year
- Template-based protein design with Raygun☆81Apr 12, 2026Updated last month
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Feb 21, 2026Updated 3 months ago
- Building more accurate protein structures from backbone torsion angles☆15Mar 21, 2025Updated last year
- ☆33Oct 14, 2024Updated last year