Alternatives and similar repositories for ProCALM

Users that are interested in ProCALM are comparing it to the libraries listed below

• HannesStark / CodonMPNN
  ☆28Updated 9 months ago
• petergroth / FLOP
  This is the official code repository for the paper FLOP: Tasks for Fitness Landscapes Of Protein wildtypes by Groth et al.
  ☆22Updated 2 years ago
• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆33Updated 11 months ago
• ProteinDesignLab / protein_shapes
  Metrics to evaluate distributional coverage of generative models of protein structures.
  ☆17Updated last month
• Kuhlman-Lab / PIPPack
  Implementation of Protein Invariant Point Packer (PIPPack)
  ☆35Updated last year
• zzhangzzhang / pLMs-interpretability
  ☆29Updated 11 months ago
• matsagad / mres-project
  Conditioning diffusion models for scaffolding protein motifs. A repository for my master's dissertation.
  ☆10Updated 9 months ago
• sirius777coder / GPDL
  Generative diverse protein backbones by protein language model
  ☆33Updated 9 months ago
• Croydon-Brixton / proteinmpnn_wrapper
  A thin wrapper around ProteinMPNN for convenient sampling without having to write out or consume files
  ☆11Updated last year
• johnyang101 / pmpnndiff
  Repository for Fast Non-autoregressive Inverse Folding with Discrete Diffusion
  ☆18Updated last year
• gitter-lab / metl-pretrained
  Pretrained METL models with minimal dependencies
  ☆15Updated 2 weeks ago
• compsciencelab / mdCATH
  This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…
  ☆46Updated 10 months ago
• luwei0917 / BindingGYM
  ☆29Updated 2 months ago
• mjendrusch / salad
  protein structure generation with sparse all-atom denoising models
  ☆40Updated 2 weeks ago
• LSSI-ETH / meta-learning-for-protein-engineering
  Meta learning addresses noisy and under-labeled data in machine learning-guided antibody engineering (https://doi.org/10.1016/j.cels.2023…
  ☆20Updated last year
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆39Updated last year
• Profluent-AI / proseLM-public
  Adapting protein language models for structure-conditioned design
  ☆41Updated last year
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆54Updated 4 months ago
• Graylab / MaskedProteinEnT
  ☆12Updated 10 months ago
• ai4protein / VenusX
  ☆13Updated 2 weeks ago
• Profluent-Internships / MMDiff
  Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion
  ☆58Updated last year
• ohuelab / Solubility_AfDesign
  Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol
  ☆32Updated 2 years ago
• KoubaPetr / Flexpert
  Code for the paper "Learning to engineer protein flexibility".
  ☆22Updated 2 weeks ago
• dakpinaroglu / Frame2seq
  Structure-conditioned masked language modeling for protein sequence design
  ☆69Updated last year
• ProteinDesignLab / protpardelle-1c
  Updated Protpardelle models with more robust motif scaffolding and multichain support
  ☆38Updated this week
• Junjie-Zhu / IDPFold
  Precise Generation of Conformational Ensembles for Intrinsically Disordered Proteins with IDPFold
  ☆22Updated last year
• HySonLab / Ligand_Generation
  Target-aware Variational Auto-encoders for Ligand Generation with Multimodal Protein Representation Learning
  ☆30Updated last year
• A4Bio / FoldToken_open
  ☆22Updated 11 months ago
• bwicky / oligomer_hallucination
  ☆36Updated last year
• THGLab / int2cart
  Building more accurate protein structures from backbone torsion angles
  ☆14Updated 6 months ago