Alternatives and similar repositories for ProCALM

Users that are interested in ProCALM are comparing it to the libraries listed below

• HannesStark / CodonMPNN
  ☆30Updated last year
• rdilip / kanzi
  ☆29Updated 2 months ago
• Kuhlman-Lab / PIPPack
  Implementation of Protein Invariant Point Packer (PIPPack)
  ☆35Updated last year
• petergroth / FLOP
  This is the official code repository for the paper FLOP: Tasks for Fitness Landscapes Of Protein wildtypes by Groth et al.
  ☆22Updated 2 years ago
• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆37Updated last year
• sirius777coder / GPDL
  Generative diverse protein backbones by protein language model
  ☆34Updated 3 months ago
• LSSI-ETH / meta-learning-for-protein-engineering
  Meta learning addresses noisy and under-labeled data in machine learning-guided antibody engineering (https://doi.org/10.1016/j.cels.2023…
  ☆20Updated last year
• ProteinDesignLab / protein_shapes
  Metrics to evaluate distributional coverage of generative models of protein structures.
  ☆19Updated 5 months ago
• matsagad / mres-project
  Conditioning diffusion models for scaffolding protein motifs. A repository for my master's dissertation.
  ☆11Updated last year
• johnyang101 / pmpnndiff
  Repository for Fast Non-autoregressive Inverse Folding with Discrete Diffusion
  ☆18Updated last year
• SimonKitSangChu / EsmTherm
  ☆13Updated last year
• ai4protein / VenusX
  ☆16Updated 4 months ago
• HySonLab / LatentDE
  LatentDE: Latent-based Directed Evolution for Protein Sequence Design
  ☆37Updated 10 months ago
• Profluent-AI / proseLM-public
  Adapting protein language models for structure-conditioned design
  ☆40Updated last year
• Croydon-Brixton / proteinmpnn_wrapper
  A thin wrapper around ProteinMPNN for convenient sampling without having to write out or consume files
  ☆12Updated last year
• Graylab / MaskedProteinEnT
  ☆12Updated last year
• Profluent-Internships / MMDiff
  Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion
  ☆58Updated last year
• luwei0917 / BindingGYM
  ☆40Updated 6 months ago
• gitter-lab / metl-pretrained
  Pretrained METL models with minimal dependencies
  ☆16Updated 4 months ago
• ProteinDesignLab / protpardelle-1c
  Updated Protpardelle models with more robust motif scaffolding and multichain support
  ☆64Updated last month
• Gleghorn-Lab / DSM
  Protein representation and design under a single training scheme
  ☆24Updated last month
• dakpinaroglu / Frame2seq
  Structure-conditioned masked language modeling for protein sequence design
  ☆70Updated 2 years ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆40Updated last year
• ohuelab / Solubility_AfDesign
  Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol
  ☆33Updated 2 years ago
• THGLab / int2cart
  Building more accurate protein structures from backbone torsion angles
  ☆14Updated 10 months ago
• mjendrusch / salad
  protein structure generation with sparse all-atom denoising models
  ☆57Updated last month
• Gonglab-THU / GDFold2
  ☆17Updated last year
• violet-sto / Bridge-IF
  Official implementation of NeurIPS'24 paper "Bridge-IF: Learning Inverse Protein Folding with Markov Bridges"
  ☆18Updated 10 months ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆61Updated 8 months ago
• pengzhangzhi / Awesome-List-Protein-Binding-Site-Prediction-
  List of papers on protein binding site prediction
  ☆11Updated 2 years ago