zaixizhang / FAIRLinks
NeurIPS 2023 Spotlight paper: Full atom protein pocket design via iterative refinement
☆48Updated last year
Alternatives and similar repositories for FAIR
Users that are interested in FAIR are comparing it to the libraries listed below
Sorting:
- Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion☆58Updated last year
- Source code of the paper "Protein Sequence and Structure Co-Design with Equivariant Translation"☆24Updated last year
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆59Updated 2 weeks ago
- Implementation of the Confidence Bootstrapping procedure for protein-ligand docking.☆26Updated last year
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆59Updated last year
- Codebase of paper "Structure Language Models for Protein Conformation Generation" (ICLR'25)☆58Updated 3 months ago
- This repo contains the codes for our paper "Generalist Equivariant Transformer Towards 3D Molecular Interaction Learning" (ICML 2024).☆30Updated 8 months ago
- Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)☆58Updated 11 months ago
- Code for 'On Pre-trained Language Models For Antibody'☆33Updated 2 years ago
- Official repository of ReactZyme☆33Updated 7 months ago
- ☆12Updated last year
- Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)☆35Updated last year
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆44Updated 4 months ago
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆95Updated 2 years ago
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆81Updated last week
- Code implementation of "Diffusion probabilistic modeling of protein backbones in 3D for the motif-scaffolding problem" https://arxiv.org/…☆74Updated last year
- Structure-conditioned masked language modeling for protein sequence design☆62Updated last year
- A standardized protein design benchmark for motif-scaffolding problems☆59Updated last month
- A Novel Approach for Protein Sequence Design Based on Secondary Strucure☆22Updated 2 months ago
- Code for Pre-training Protein Encoder via Siamese Sequence-Structure Diffusion Trajectory Prediction (https://arxiv.org/abs/2301.12068)☆40Updated last year
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆109Updated 3 months ago
- Multimodal Pretraining for Unsupervised Protein Representation Learning☆22Updated 10 months ago
- Official implementation of "Learning the language of protein structures"☆32Updated 5 months ago
- ☆41Updated last year
- Highly accurate and efficient deep learning paradigm for full-atom protein loop modeling with KarmaLoop☆12Updated 11 months ago
- Code for the paper Context-Guided Diffusion for Out-of-Distribution Molecular and Protein Design☆38Updated 10 months ago
- ☆18Updated 7 months ago
- [ICLR2025] Official Implementation of IgGM: A Generative Model for Functional Antibody and Nanobody Design☆74Updated 3 weeks ago
- Bib'23: Improved the Heterodimer Protein Complex Prediction with Protein Language Models☆15Updated last year
- ☆71Updated 3 months ago