Alternatives and similar repositories for HyperMPNN

Users that are interested in HyperMPNN are comparing it to the libraries listed below

• bunzela / AIzymes
  ☆42Updated 2 weeks ago
• Kuhlman-Lab / evopro
  ☆81Updated last month
• mabr3112 / riff_diff_protflow
  ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.
  ☆29Updated last week
• WillHua127 / GENzyme
  Official repository of GENzyme
  ☆53Updated 7 months ago
• richardshuai / fampnn
  Sidechain conditioning and modeling for full-atom protein sequence design
  ☆110Updated 3 weeks ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆63Updated this week
• luo-group / MODIFY
  ML-optimized library design with improved fitness and diversity for protein engineering
  ☆35Updated 11 months ago
• LBM-EPFL / CARBonAra
  Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…
  ☆44Updated 7 months ago
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆44Updated 7 months ago
• GMdSilva / gms_natcomms_1705932980_data
  Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2
  ☆39Updated last year
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆36Updated 2 weeks ago
• regeneron-mpds / propermab
  ☆29Updated 3 months ago
• liuyf020419 / SCUBA-D
  ☆60Updated last year
• bene837 / af2seq
  ☆43Updated 10 months ago
• ikalvet / invrotzyme
  Utility for building inverse rotamer assemblies out of a Rosetta matcher/enzdes constraint file.
  ☆21Updated 4 months ago
• bcov77 / silent_tools
  A bunch of shell utilities for dealing the silent files
  ☆63Updated 2 months ago
• PKUliujl / GeoSeqBuilder
  ☆28Updated 5 months ago
• KexinZhangResearch / PhysDock
  Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction
  ☆63Updated 3 months ago
• danny305 / StabilityOracle
  ☆27Updated last year
• baker-laboratory / CA_RFDiffusion
  ☆55Updated last month
• ELELAB / RosettaDDGPrediction
  ☆70Updated 5 months ago
• Ryan-Hu-Hu-Hu / GRACE
  GRACE: Generative Renaissance in Artificial Computational Enzyme Design
  ☆18Updated 6 months ago
• ohuelab / ColabFold-cycpep-dock
  Making Protein folding accessible to all!
  ☆22Updated last year
• Mingchenchen / AF3Score
  A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation
  ☆60Updated last month
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆61Updated 7 months ago
• sokrypton / af2bind
  ☆50Updated 3 weeks ago
• Jfeldman34 / AF3Complex
  ☆31Updated 3 weeks ago
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆67Updated 10 months ago
• CarbonMatrixLab / carbonnovo
  Official open-source of CarbonNovo: Joint Design of Protein Structure and Sequence Using a Unified Energy-based Model
  ☆24Updated 8 months ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆51Updated last month