NVlabs / protcomposerLinks
☆41Updated 3 months ago
Alternatives and similar repositories for protcomposer
Users that are interested in protcomposer are comparing it to the libraries listed below
Sorting:
- Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion☆58Updated last year
- Source code for RNA-FrameFlow: SE(3) Flow Matching for 3D RNA Backbone Design☆64Updated 3 weeks ago
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆61Updated last month
- Code for the paper Context-Guided Diffusion for Out-of-Distribution Molecular and Protein Design☆38Updated 11 months ago
- This repository implements Gibbs sampling with Graph-based Smoothing☆38Updated last year
- NeurIPS 2023 Spotlight paper: Full atom protein pocket design via iterative refinement☆48Updated last year
- Source code of the paper "Protein Sequence and Structure Co-Design with Equivariant Translation"☆24Updated last year
- A standardized protein design benchmark for motif-scaffolding problems☆61Updated last month
- Code for Pre-training Protein Encoder via Siamese Sequence-Structure Diffusion Trajectory Prediction (https://arxiv.org/abs/2301.12068)☆40Updated last year
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆95Updated 2 years ago
- In-silico design pipeline for evaluating protein structure diffusion models.☆26Updated last year
- RNAFlow: RNA Structure & Sequence Design via Inverse Folding-Based Flow Matching☆62Updated 10 months ago
- Code implementation of "Diffusion probabilistic modeling of protein backbones in 3D for the motif-scaffolding problem" https://arxiv.org/…☆74Updated last year
- Implementation of the Confidence Bootstrapping procedure for protein-ligand docking.☆26Updated last year
- The Enhanced Database of Interacting Protein Structures for Interface Prediction☆49Updated last year
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆82Updated last month
- ISMB-24/Bioinformatics: Tertiary Structure-based RNA Inverse Folding with Generative Diffusion Models☆49Updated 7 months ago
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆78Updated last year
- ☆62Updated last week
- This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…☆43Updated 7 months ago
- Official implementation of "Learning the language of protein structures"☆33Updated this week
- Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)☆35Updated last year
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆78Updated last year
- Multimodal Pretraining for Unsupervised Protein Representation Learning☆22Updated 10 months ago
- Structure-conditioned masked language modeling for protein sequence design☆64Updated last year
- ☆31Updated last month
- ☆27Updated last week
- Codebase of paper "Structure Language Models for Protein Conformation Generation" (ICLR'25)☆58Updated 4 months ago
- Implementation of DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing☆87Updated last year
- Code for 'On Pre-trained Language Models For Antibody'☆33Updated 2 years ago