☆38Dec 6, 2023Updated 2 years ago
Alternatives and similar repositories for MetaPhage
Users that are interested in MetaPhage are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This is graphanalyzer.py, a script designed to automatically interpret the outputs generated by vConTACT2 when using the INPHARED databas…☆19Nov 29, 2023Updated 2 years ago
- Rapid discovery of novel prophages using biological feature engineering and machine learning☆38Dec 20, 2024Updated last year
- Workflow to assign Taxonomy to a bacteriophage genome isolate☆38Mar 25, 2025Updated 11 months ago
- Providing up-to-date phage genome databases, metrics and useful input files for a number of bioinformatic pipelines.☆80Apr 16, 2025Updated 11 months ago
- WtP: Phage identification via nextflow and docker or singularity☆104Updated this week
- 🫧🧬 From fragmented assemblies to high-quality bacteriophage genomes☆81Dec 4, 2025Updated 3 months ago
- Phage annotations and predictions. A spae is a prediction or foretelling. We'll foretell you what your phage is doing!☆41Feb 26, 2026Updated 3 weeks ago
- Cenote-Taker2: Discover and Annotate Divergent Viral Contigs (Please use Cenote-Taker 3 instead)☆55Jan 19, 2024Updated 2 years ago
- Taxonomic classification of viruses at Order and Family level☆21Mar 1, 2023Updated 3 years ago
- Downstream processing of VAMB binning for Viral Elucidation☆54Jul 3, 2024Updated last year
- A python library for predicting phage lifestyle based on genome sequence☆41Aug 9, 2023Updated 2 years ago
- ☆25Jun 20, 2023Updated 2 years ago
- Throughput PhATE processing of draft or finished phage genomes☆14Apr 19, 2021Updated 4 years ago
- A wrapper to identify, bin, classify, and predict host-viral relationship for viruses☆86Dec 27, 2024Updated last year
- Virus Protein Family tools☆31Jul 20, 2022Updated 3 years ago
- A simple program to classify the lifestyle of phages.☆17May 22, 2023Updated 2 years ago
- VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies☆147Mar 4, 2026Updated 2 weeks ago
- Predict prokaryotic host for phage metagenomic sequences☆55Sep 17, 2024Updated last year
- geNomad: Identification of mobile genetic elements☆296Updated this week
- A tool to measure bacteriophages plaque sizes☆18May 12, 2023Updated 2 years ago
- Computation of average nucleotide identity with the use of MMseqs2☆16Dec 11, 2024Updated last year
- Fast and sensitive discovery of complete phages and prophages in bacterial genome sequences☆22Dec 16, 2024Updated last year
- Phage Annotation using Protein Structures☆154Feb 9, 2026Updated last month
- Binning Virus Genomes from Metagenomes☆72Jul 13, 2022Updated 3 years ago
- ☆10Mar 29, 2025Updated 11 months ago
- A containerized bioinformatics pipeline for viral metagenomic data analysis☆37Aug 4, 2024Updated last year
- Systematic search of all known anti-phage systems.☆149Jan 22, 2026Updated 2 months ago
- a comparative genome browser for bacteriophages☆21Jan 17, 2025Updated last year
- ☆17May 26, 2022Updated 3 years ago
- A hybrid assembly and MAG recovery pipeline (and more!)☆104Jan 27, 2026Updated last month
- ☆53May 5, 2025Updated 10 months ago
- ☆11Jul 3, 2022Updated 3 years ago
- PHANOTATE: a gene caller for phages.☆85Dec 2, 2024Updated last year
- Viral protein family functional prediction using protein language models☆22Jan 6, 2026Updated 2 months ago
- This repository contains scripts used in the manuscript "Massive expansion of human gut bacteriophage diversity"☆19Feb 3, 2021Updated 5 years ago
- Discover and annotate the virome☆59Feb 11, 2026Updated last month
- Predict the function of phage hypothetical proteins using an LSTM model trained with Phage Synteny☆59Jun 4, 2025Updated 9 months ago
- ultrafast taxonomic profiling and genome querying for metagenomic samples by abundance-corrected minhash.☆298Feb 3, 2026Updated last month
- ☆21Nov 17, 2022Updated 3 years ago