refresh-bio / vclustLinks
Fast and accurate tool for calculating Average Nucleotide Identity (ANI) and clustering virus genomes and metagenomes 
☆91Updated 5 months ago
Alternatives and similar repositories for vclust
Users that are interested in vclust are comparing it to the libraries listed below
Sorting:
- Unified Human Gut Virome Catalog☆36Updated last week
- Program to quickly and accurately assemble plasmids in hybrid and long-only sequenced bacterial isolates☆78Updated last month
- Jaeger is a quick and precise tool for detecting phages in sequence assemblies.☆35Updated last week
- ☆31Updated 3 weeks ago
- EzAAI - High Throughput Prokaryotic AAI Calculator☆44Updated 2 months ago
- A toolkit for exploring prokaryotic methylation and base modifications in nanopore sequencing☆50Updated last month
- A Python package for obtaining complete lineages and the lowest common ancestor (LCA) from a set of taxonomic identifiers☆50Updated 8 months ago
- A toolkit for prokaryotic comparative genomics☆51Updated last week
- ☆79Updated this week
- A python library for predicting phage lifestyle based on genome sequence☆37Updated 2 years ago
- Predict the function of phage hypothetical proteins using an LSTM model trained with Phage Synteny☆54Updated 4 months ago
- A tool for drawing ANI clustermap between all-vs-all microbial genomes☆85Updated 5 months ago
- More scalable dereplication for metagenome assembled genomes☆71Updated 2 weeks ago
- PHANOTATE: a gene caller for phages.☆78Updated 10 months ago
- Predict prokaryotic host for phage metagenomic sequences☆52Updated last year
- ☆62Updated last year
- Precise host read removal☆107Updated last month
- Binning Virus Genomes from Metagenomes☆66Updated 3 years ago
- Comparisons of multiple different prophage predictions☆26Updated 3 years ago
- ARG normalization by mapping to the ARO ontology.☆59Updated 3 months ago
- Downstream processing of VAMB binning for Viral Elucidation☆50Updated last year
- ☆33Updated last year
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆63Updated 2 weeks ago
- Follow up to Grace Blackwell's 661k dataset, for 2023☆124Updated 2 months ago
- A tool for removing redundant genomes from a set of assemblies☆77Updated last month
- Bioinformatics pipeline for recovery and analysis of metagenome-assembled genomes☆51Updated last week
- Improvement of metagenome-assembled genomes☆54Updated 5 years ago
- A workflow and scripts for large-scale antiSMASH analyses☆44Updated 6 months ago
- viralVerify: viral contig verification tool☆72Updated 4 years ago
- Bifrost graph gene caller.☆95Updated last month