DrMicrobit / miraLinks
MIRA sequence assembler
☆30Updated 11 months ago
Alternatives and similar repositories for mira
Users that are interested in mira are comparing it to the libraries listed below
Sorting:
- In-depth characterization and annotation of differences between two sets of DNA sequences☆63Updated 5 years ago
- perSVade: personalized Structural Variation detection☆40Updated 3 months ago
- A high performance tool to identify orthologs and paralogs across genomes.☆27Updated 2 years ago
- hifiasm_meta - de novo metagenome assembler, based on hifiasm, a haplotype-resolved de novo assembler for PacBio Hifi reads.☆68Updated 2 weeks ago
- ☆20Updated 3 years ago
- Multi-platform genome assembly pipeline for Illumina, Nanopore and PacBio reads☆63Updated last year
- Visualize whole genome alignments as linear maps☆74Updated 4 months ago
- Strain Resolution ON Graphs☆49Updated 2 years ago
- ☆29Updated 4 years ago
- Tools for detecting DNA modifications from single molecule, real-time sequencing data☆26Updated 3 years ago
- GSAlign: an ultra-fast sequence alignment algorithm for intra-species genome comparison☆60Updated last year
- Find Unique genomic Regions☆32Updated last month
- ☆30Updated 2 years ago
- EnTAP is moving to GitLab for future changes https://gitlab.com/PlantGenomicsLab/EnTAP☆41Updated 10 months ago
- showTree can visualize the phylogeny, protein sequences and protein domains of a gene family in one figure.☆32Updated 6 years ago
- A Nextflow pipeline for evaluating assembly quality☆38Updated last month
- ☆33Updated 4 years ago
- This is the codebase for Recycler, described in our manuscript: https://academic.oup.com/bioinformatics/article/33/4/475/2623362, by Roye…☆58Updated 4 years ago
- Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.☆39Updated 2 years ago
- Repository for scripts and resources used for metagenomics with Nanopore, PacBio and Illumina sequencing☆21Updated 2 years ago
- Ancient microbiome snakemake workflow☆27Updated 8 months ago
- MarginPolish: Graph based assembly polishing☆47Updated 5 years ago
- Pangenome analysis of eukaryotes.☆20Updated 5 years ago
- Remove lambda phage reads from a fastq file☆29Updated 2 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆36Updated 6 years ago
- Convert genbank files to a swath of other formats☆23Updated 2 years ago
- ☆26Updated 4 years ago
- A versatile pairwise aligner for genomic and spliced nucleotide sequences☆56Updated last year
- A nextflow pipeline for decontamination of short reads, long reads and contigs☆55Updated 5 months ago
- SHOOT.bio - the phylogenetic search engine☆27Updated 2 years ago