☆12Aug 23, 2023Updated 3 years ago
Alternatives and similar repositories for Syllable-PBWT
Users that are interested in Syllable-PBWT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Importing vg json graphs to Python data structures.☆12Nov 11, 2020Updated 5 years ago
- ☆10Nov 4, 2021Updated 4 years ago
- iLASH - IBD Estimation Using Locality Sensitive Hashing☆18Nov 6, 2025Updated 10 months ago
- Recomb-Mix: a local ancestry inference tool☆18Sep 1, 2026Updated 2 weeks ago
- Lightweight C++ library for reading FASTA and FASTQ files.☆11Feb 16, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆11Dec 9, 2022Updated 3 years ago
- Calculates the probability of a haplotype given a population reference panel☆12Dec 9, 2024Updated last year
- SUPBUB is a tool that, in linear time, finds out superbubbles(special graph-structures) in a directed graph.☆12Sep 19, 2019Updated 7 years ago
- ☆11Aug 2, 2025Updated last year
- genome variation graphs constructed from HLA GRCh38 ALTs☆24Dec 24, 2021Updated 4 years ago
- DNA and RNA variant calling pipelines with HLA typing and Neoantigen predictions☆12Jul 8, 2021Updated 5 years ago
- MONI: A Pangenomic Index for Finding MEMs☆38Mar 25, 2025Updated last year
- Header-only, gzread-like reader for gzip, bz2, and xz.☆11Aug 8, 2018Updated 8 years ago
- For bluntifying overlapped GFAs☆13Jul 26, 2024Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Optimal sequence-to-graph alignment with recombinations☆41Apr 28, 2026Updated 4 months ago
- Economic Genome Assembly from Low Coverage Illumina and Nanopore Data☆19Feb 15, 2022Updated 4 years ago
- Substring index for paths in a graph☆63Aug 19, 2026Updated last month
- Alistair Miles' blog☆12Jan 10, 2025Updated last year
- A whole-genome and alignment-free prokaryotic phylogeny tool☆23May 26, 2026Updated 3 months ago
- nimble aligner that will map your reads to the references on a laptop