Alternatives and similar repositories for GDBr:

Users that are interested in GDBr are comparing it to the libraries listed below

• JunKimCNU / JunKimLabTutorial
  충남대학교 김준 연구실 튜토리얼
  ☆36Updated 3 months ago
• ChangLabSNU / PaperSorter
  Sends alerts to a Slack channel for potentially interesting new articles selected from RSS feeds.
  ☆39Updated 6 months ago
• JunKim-Worms / sequencing_for_genetics
  유전학자를 위한 시퀀싱 자료 분석
  ☆23Updated 4 years ago
• hyeshik / sars-cov-2-transcriptome
  Supplemental code for "the architecture of SARS-CoV-2 transcriptome" paper
  ☆100Updated 5 years ago
• JunKim-Worms / unix_tutorial
  ☆11Updated 4 years ago
• SouthGreenPlatform / VcfHunter
  VcfExplorer regroups several programs which principal aims are to map DNA and RNAseq data onto reference genome sequence, perform variant…
  ☆13Updated last year
• laelbarlow / amoebae
  Workflow for identifying and classifying homologous gene/protein sequences
  ☆20Updated 3 months ago
• KennethJHan / GenomeAnalysisTutorial
  Genome Analysis Pipeline for Lecture
  ☆18Updated 3 years ago
• PacificBiosciences / pbmarkdup
  Mark duplicate reads from PacBio sequencing of an amplified library
  ☆11Updated 2 months ago
• ThomasDOtto / ILRA
  Improvement of Long Read Assemblies (ILRA) is a pipeline to help in the post assembly process (finishing) by cleaning and merging contigs…
  ☆13Updated 5 months ago
• GenomicsAotearoa / Kakapo
  Scripts and code for Kākāpō genomic data
  ☆14Updated last year
• magnusmanske / lookseq
  ☆5Updated 3 years ago
• at-cg / mm2-plus
  Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)
  ☆31Updated 3 months ago
• vgl-hub / rdeval
  Multithreaded read analysis
  ☆11Updated this week
• c5shen / EMMA
  an ensemble usage of MAFFT-linsi --add on large datasets
  ☆12Updated 10 months ago
• dmcblab / InfoGenomeR
  ☆10Updated 4 months ago
• yjx1217 / NanoTrans
  An integrated computational framework for comprehensive transcriptome analyses with Nanopore direct-RNA sequencing data
  ☆14Updated 7 months ago
• CompGenomeLab / PHACT
  This is a phylogeny workflow for batch submission to HPC cluster built with Slurm queue manager
  ☆9Updated last year
• c5shen / WITCH
  WITCH is a multiple sequence alignment method that uses multiple weighted HMMs to align unaligned sequences and find consensuses.
  ☆12Updated last month
• Gaius-Augustus / GUSHR
  Generating UTRs from SHort Reads
  ☆12Updated 4 years ago
• medvedevgroup / vargeno
  Towards fast and accurate SNP genotyping from whole genome sequencing data for bedside diagnostics.
  ☆20Updated 6 years ago
• Kuanhao-Chao / Wheeler_Graph_Toolkit
  🔎 wheeler graph recognition algorithm, visualization and generation
  ☆17Updated last year
• KyoungYeulLee / 3Cnet
  ☆17Updated last year
• HKU-BAL / Clair3-Trio
  Clair3-Trio: variant calling in trio using Nanopore long-reads
  ☆14Updated last year
• gatech-genemark / GeneMark-ETP
  GeneMark-ETP: gene finding in eukaryotic genomes supported by transcriptome sequencing and protein homology
  ☆21Updated 2 weeks ago
• hyeshik / poreplex
  A versatile sequenced read processor for nanopore direct RNA sequencing
  ☆79Updated 4 years ago
• edawson / svaha
  Convert structural variants to sequence graphs [ VCF + FASTA ---> GFA ]
  ☆12Updated last year
• lotharwissler / bioinformatics
  ☆10Updated 12 years ago
• lh3 / jstreeview
  Interactive phylogenetic tree viewer/editor
  ☆46Updated last year
• Grice-Lab / HmmUFOtu
  An HMM and Phylogenetic Placement based Ultra-Fast Taxonomy Assignment Tool for 16S sequencing
  ☆11Updated last month