lpipes / AncestralClustLinks
AncestralClust
☆11Updated 2 months ago
Alternatives and similar repositories for AncestralClust
Users that are interested in AncestralClust are comparing it to the libraries listed below
Sorting:
- scripts for sequence and feature conversion, annotation, analysis ...☆28Updated 6 months ago
- An R package to infer and analyze synteny networks from protein sequences☆30Updated last month
- BUSCOMP: BUSCO Compiler and Comparison tool☆21Updated last year
- ☆26Updated 4 years ago
- Computational Analysis of Gene Expression Evolution☆43Updated last month
- Yet another Hi-C scaffolding tool☆22Updated 10 months ago
- a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees☆26Updated 7 months ago
- Diamond2GO is a set of tools that can rapidly assign Gene Ontology (GO) terms and perform functional enrichment for large-scale functiona…☆21Updated last month
- PSAURON is a machine learning model for rapid assessment of protein coding gene annotation☆39Updated 5 months ago
- A high performance tool to identify orthologs and paralogs across genomes.☆27Updated 2 years ago
- a broadly applicable tool for automated gene identification and retrieval☆31Updated 9 months ago
- Within-species genome-wide dN/dS estimation from very many genomes☆21Updated 4 years ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆29Updated 3 years ago
- A tool to filter BUSCO output into single-copy gene files for phylogenomics☆13Updated last year
- Consensus genome annotation using OMA☆26Updated 2 months ago
- A Python package for testing evolutionary hypotheses in genome-wide approaches.☆31Updated 4 years ago
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆27Updated last week
- scripts to parse and analyse MCScanX collinearity output☆32Updated 5 years ago
- MCMCtree tutorials☆24Updated last year
- Repetitive motif detection by Assembly of Repetitive K-mers. RepARK is free for academic and non-profit use. By downloading you agree wit…☆16Updated last year
- A stand-alone application for constructing websites for visualizing and browsing synteny blocks☆18Updated 4 years ago
- ☆32Updated 4 years ago
- Mapping-based Genome Size Estimation (MGSE) performs an estimation of a genome size based on a read mapping to an existing genome sequenc…☆35Updated 2 months ago
- Tools to process OrthoFinder output: Calculate the most common gene name of an orthogroup by majority vote and create plots analogous to …☆19Updated last year
- CDS prediction in transcripts☆23Updated 6 months ago
- TGSFilter: An ultra-fast and efficient tool for long reads filtering and trimming☆23Updated last year
- GRAbB (Genome Region Assembly by Baiting) is a program designed to assemble selected regions of the genome or transcriptome using referen…☆13Updated 4 years ago
- CAAStools is a bioinformatics toolbox that allows the user to identify and validate CAAS on MSA of orthologous proteins.☆21Updated last year
- ☆32Updated last year
- Small and simple scripts useful for various bioinformatics purposes e.g. extract sequences from fasta files☆21Updated 2 years ago