Alternatives and similar repositories for polysat

Users that are interested in polysat are comparing it to the libraries listed below

• alexkychen / assignPOP
  Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution.…
  ☆16Updated last year
• tbradley1013 / tree-subset-shiny
  This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees
  ☆15Updated 6 years ago
• ropensci / phylotaR
  An automated pipeline for retrieving orthologous DNA sequences from GenBank in R
  ☆24Updated 10 months ago
• fmichonneau / phylobase
  An R package that provides a base S4 class for comparative methods, incorporating one or more trees and trait data
  ☆19Updated last year
• gmbecker / genbankr
  ☆20Updated last year
• jennahamlin / tinselR
  An Amazing Shiny App
  ☆17Updated 3 years ago
• heibl / ips
  R Interfaces to Phylogenetic Software
  ☆12Updated 3 months ago
• bobverity / MavericK
  Source code for the program MavericK, described fully at www.bobverity.com/maverick
  ☆12Updated 6 years ago
• cjbattey / driftR
  population genetic simulations with R and Shiny
  ☆28Updated 7 months ago
• ropensci / babette
  babette is an R package to work with BEAST2
  ☆45Updated 3 weeks ago
• dorolin / rearrvisr
  An R package to detect, classify, and visualize genome rearrangements
  ☆14Updated 4 years ago
• DomBennett / treeman
  An R package for manipulating phylogentic trees
  ☆11Updated 4 years ago
• mwpennell / geiger-v2
  A suite of methods and models for studying evolutionary radiations
  ☆24Updated 2 years ago
• ropensci / chromer
  package for interacting with the chromosome counts database (CCDB) at https://taux.evolseq.net/CCDB_web/
  ☆12Updated last year
• KlausVigo / ggnetworx
  phylogenetic networks using ggplot2 and ggtree
  ☆13Updated 5 months ago
• ibest / Seed
  R/Shiny application for viewing microbial community data
  ☆19Updated 4 years ago
• ngs-docs / 2015-nov-adv-rna
  ☆18Updated 9 years ago
• weissmanlab / magic
  Minimal Assumption Genomic Inference of Coalescence
  ☆14Updated last year
• GuangchuangYu / ggtree-current-protocols
  Using ggtree to Visualize Data on Tree-Like Structure
  ☆24Updated 5 years ago
• liamrevell / learnPopGen
  initial commit
  ☆26Updated 2 years ago
• ropensci / beautier
  R package to generate the same BEAST2 XML parameter files as generated by BEAUti 2
  ☆13Updated last month
• ropensci / onekp
  Access sequences from the 1000 Plant Initiative (1KP)
  ☆13Updated 2 years ago
• shaunpwilkinson / insect
  Informatic Sequence Classification Trees
  ☆14Updated last week
• NovembreLab / PCAviz
  An R package to help in plotting PCA results nicely.
  ☆13Updated 5 years ago
• gavinmdouglas / FuncDiv
  R package for computing alpha and beta contributional diversity metrics
  ☆10Updated 2 years ago
• vsbuffalo / msr
  Process MS results in R, in a tidy way
  ☆17Updated 7 years ago
• dyerlab / applied_population_genetics
  A textbook on population genetics
  ☆18Updated 5 months ago
• thomasp85 / FindMyFriends
  Fast alignment-free pangenome creation and exploration
  ☆27Updated 5 years ago
• ropensci / beastier
  R package to run BEAST2
  ☆11Updated 3 weeks ago
• grunwaldlab / analysis_of_microbiome_community_data_in_r
  This is the source code for the "Analysis of Microbiome Community Data in R" ICPP 2018 workshop. The website is available at: https://gr…
  ☆16Updated last year