Alternatives and similar repositories for polysat

Users that are interested in polysat are comparing it to the libraries listed below

• alexkychen / assignPOP
  Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution.…
  ☆16Updated last year
• tbradley1013 / tree-subset-shiny
  This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees
  ☆15Updated 6 years ago
• ropensci / chromer
  package for interacting with the chromosome counts database (CCDB) at https://taux.evolseq.net/CCDB_web/
  ☆12Updated last year
• ropensci / phylotaR
  An automated pipeline for retrieving orthologous DNA sequences from GenBank in R
  ☆24Updated 11 months ago
• fmichonneau / phylobase
  An R package that provides a base S4 class for comparative methods, incorporating one or more trees and trait data
  ☆19Updated last year
• dyerlab / applied_population_genetics
  A textbook on population genetics
  ☆18Updated 6 months ago
• dorolin / rearrvisr
  An R package to detect, classify, and visualize genome rearrangements
  ☆14Updated 4 years ago
• ropensci / onekp
  Access sequences from the 1000 Plant Initiative (1KP)
  ☆13Updated 2 years ago
• KlausVigo / ggnetworx
  phylogenetic networks using ggplot2 and ggtree
  ☆13Updated 6 months ago
• mwpennell / geiger-v2
  A suite of methods and models for studying evolutionary radiations
  ☆24Updated 2 years ago
• cjbattey / driftR
  population genetic simulations with R and Shiny
  ☆28Updated 7 months ago
• weissmanlab / magic
  Minimal Assumption Genomic Inference of Coalescence
  ☆14Updated last year
• heibl / ips
  R Interfaces to Phylogenetic Software
  ☆12Updated 4 months ago
• jennahamlin / tinselR
  An Amazing Shiny App
  ☆17Updated 3 years ago
• gmbecker / genbankr
  ☆20Updated last year
• NovembreLab / PCAviz
  An R package to help in plotting PCA results nicely.
  ☆13Updated 5 years ago
• ropensci / babette
  babette is an R package to work with BEAST2
  ☆46Updated 2 weeks ago
• ngs-docs / 2015-nov-adv-rna
  ☆18Updated 9 years ago
• coleoguy / evobir
  R package: Evolutionary biology in R
  ☆17Updated last year
• jacobimarsh / crosshap
  ☆12Updated 7 months ago
• ropensci / beastier
  R package to run BEAST2
  ☆11Updated last month
• ibest / Seed
  R/Shiny application for viewing microbial community data
  ☆19Updated 4 years ago
• liamrevell / learnPopGen
  initial commit
  ☆26Updated 2 years ago
• bobverity / MavericK
  Source code for the program MavericK, described fully at www.bobverity.com/maverick
  ☆12Updated 7 years ago
• ScientistJake / Shiny_BLAST
  ☆17Updated 6 years ago
• StoreyLab / popkin
  R package to estimate kinship and FST from SNP data
  ☆21Updated 8 months ago
• devillemereuil / QGglmm
  Compute various quantitative genetics parameters from a Generalised Linear Mixed Model (GLMM) estimates. Especially, it yields the observ…
  ☆16Updated 5 months ago
• sa-lee / starmie
  starmie: plotting and inference for population structure models
  ☆13Updated 6 years ago
• dib-lab / SSUsearch
  A pipeline for extracting SSU rRNA gene from wgs data and applying them for further diversity analysis
  ☆10Updated 9 years ago
• lamho86 / phylolm
  ☆37Updated 7 months ago