MarioniLab / CELLOseqLinks
Transposable element expression at unique loci in single cells with CELLO-seq
☆8Updated last year
Alternatives and similar repositories for CELLOseq
Users that are interested in CELLOseq are comparing it to the libraries listed below
Sorting:
- A pipeline for Smooth-seq data analysis.☆10Updated 3 years ago
- Scripts and notebooks used in Akgol Oksuz et al. paper☆11Updated 4 years ago
- Suite of analysis tools for spatial total RNA-sequencing☆12Updated last year
- Computational analyses of WGS, mate-pair, RNA-seq, Hi-C and Capture-C data from highly rearranged balancer chromosomes in Drosophila mela…☆10Updated 5 years ago
- R Package for phasing of single cell Strand-seq data☆10Updated 6 months ago
- ☆12Updated 4 years ago
- Code and data from Koche et al. Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma (2020)☆15Updated 4 years ago
- SigProfilerTopography allows evaluating the effect of chromatin organization, histone modifications, transcription factor binding, DNA re…☆20Updated 4 months ago
- SCAN2 is a somatic SNV and indel genotyper for single cells amplified by Primary Template-Directed Amplification (PTA)☆13Updated 3 weeks ago
- ☆8Updated 2 years ago
- Scripts used for the ACT paper☆12Updated 4 years ago
- Analysis pipeline for our circSC manuscript☆13Updated 3 years ago
- ScisorWiz: Differential Isoform Visualizer for Long-Read RNA Sequencing Data☆17Updated last year
- ☆10Updated 3 years ago
- Dingpw / Endothelial-Cell-Heterogeneity-and-Microglia-Regulons-Revealed-by-A-Pig-Cell-Landscape-at-Single-cel☆15Updated 2 years ago
- ☆11Updated 6 years ago
- nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis☆18Updated 2 years ago
- Analysis repository for "Droplet-based combinatorial indexing for massive scale single-cell epigenomics"☆11Updated 5 years ago
- Whole genome workflows☆12Updated 8 months ago
- python API to the CoGAPS NMF package☆19Updated last month
- The R package "sarlacc" contains a pipeline to analyse nanopore sequencing data. It trims adapter sequences, retrieves optional UMI's, cl…☆13Updated 6 years ago
- Quantify the Concurrence of DNA Methylation and De-methylation☆8Updated 3 years ago
- Custom scripts used in "Spatiotemporal DNA Methylome Dynamics of the Developing Mammalian Fetus"☆11Updated 4 years ago
- ☆17Updated 2 years ago
- ☆12Updated last month
- ☆18Updated 4 years ago
- Analysis tool for NG-Capture-C, Tri-C and Tiled-C data☆9Updated 2 weeks ago
- ☆11Updated 4 years ago
- TRUST4 manuscript evaluation☆15Updated 3 years ago
- ☆17Updated 2 years ago