☆21Feb 16, 2026Updated 2 weeks ago
Alternatives and similar repositories for wags
Users that are interested in wags are comparing it to the libraries listed below
Sorting:
- WDL’s and Dockerfiles for assembly QC process☆72Jul 26, 2025Updated 7 months ago
- DNAscan2 is a fast and efficient bioinformatics pipeline that allows for the analysis of DNA Next Generation sequencing data, requiring v…☆14May 7, 2024Updated last year
- ☆12Jun 7, 2024Updated last year
- ☆12Sep 27, 2023Updated 2 years ago
- ☆12Nov 6, 2023Updated 2 years ago
- ☆15Apr 10, 2024Updated last year
- From QC to summary statistics☆17Jun 27, 2020Updated 5 years ago
- WES HLA Typing based on multiple alternative tools☆18Mar 8, 2021Updated 4 years ago
- Secure and federated genome-wide association studies☆17Mar 19, 2025Updated 11 months ago
- Please consider using/contributing to https://github.com/nf-core/sarek☆18Jan 3, 2019Updated 7 years ago
- Functional annotation pipeline for proteins from non-model organisms implemented in Nextflow☆19Feb 28, 2022Updated 4 years ago
- A deep learning-based SNP calling method to identify SNPs based on low-coverage Nanopore sequencing reads.☆21Nov 20, 2022Updated 3 years ago
- Analysis pipeline for CUT&TAG data☆23Sep 2, 2020Updated 5 years ago
- fork of the GPU genome aligner☆36Jan 21, 2026Updated last month
- Large scale ancestry inference from PCA data☆23May 2, 2023Updated 2 years ago
- Gene Co-expression Network analysis pipeline☆25Jul 3, 2023Updated 2 years ago
- An accurate repeat detection from Nanopore data using deep learning and image techniques☆24Feb 28, 2023Updated 3 years ago
- A pipeline to investigate horizontal gene transfer from NGS data☆26Nov 20, 2025Updated 3 months ago
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆24Nov 18, 2025Updated 3 months ago
- Variant catalogue pipeline☆26Jan 30, 2026Updated last month
- Reproducibility notebooks for scPoli☆23May 5, 2023Updated 2 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 2 years ago
- Variant caller GUI + genetic disease analysis☆22Apr 29, 2020Updated 5 years ago
- MIRA sequence assembler☆31Jan 2, 2025Updated last year
- Influenza genome analysis Nextflow workflow☆31Sep 15, 2025Updated 5 months ago
- A library for manipulating bioinformatics sequencing formats in Apache Spark☆32Updated this week
- Workflows used for processing whole genome sequence data + germline variant calling. This Repository has been archived, please visit the …☆28Jan 4, 2021Updated 5 years ago
- ☆29Feb 17, 2021Updated 5 years ago
- Detection and classification selective sweep use domain adaptive model☆10Apr 29, 2024Updated last year
- ☆21May 6, 2025Updated 10 months ago
- Automated processing of Sanger sequencing data, taxonomic profiling, and generation of microbial strain libraries☆12Jan 4, 2026Updated 2 months ago
- NanoReviser: An Error-correction Tool for Nanopore Sequencing Based on a Deep Learning Algorithm☆28May 9, 2024Updated last year
- ☆35May 23, 2022Updated 3 years ago
- ☆33Nov 6, 2022Updated 3 years ago
- 💧Bionode-Watermill: A (Not Yet Streaming) Workflow Engine☆37Jun 27, 2018Updated 7 years ago
- Analysis of smFISH data☆12Aug 27, 2018Updated 7 years ago
- ☆10May 31, 2022Updated 3 years ago
- ☆11Feb 2, 2026Updated last month
- An analysis pipeline for long-reads from both PacBio and Oxford Nanopore Technologies (ONT), written in Nextflow.☆55Updated this week