jonahcullen / wagsLinks
☆20Updated 2 weeks ago
Alternatives and similar repositories for wags
Users that are interested in wags are comparing it to the libraries listed below
Sorting:
- This tools counts the number of specific k-mers within sequence data. The counts can then be compare to other counts to determine to comp…☆30Updated last year
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆34Updated 2 years ago
- ☆33Updated 3 years ago
- Suite of tools for analysing off-target reads to find CNVs, homozygous regions, and shared haplotypes☆31Updated 3 months ago
- Population-wide Deletion Calling☆35Updated 7 months ago
- Immuological gene typing and annotation for genome assembly☆38Updated 8 months ago
- SV analysis of the long-read sequencing data of the 1019 samples of the 1KG-ONT panel☆38Updated 7 months ago
- Structural variant (SV) analysis tools☆39Updated last year
- Fast sequencing data quality metrics☆31Updated 2 months ago
- ☆16Updated 10 months ago
- ☆31Updated 3 years ago
- Location of public benchmarking; primarily final results☆18Updated 9 months ago
- ☆22Updated 2 years ago
- Exact Tandem Repeat Finder (not a TRF replacement)☆50Updated 6 years ago
- Alignment-free genotyper for SNPs and short indels, implemented in Python.☆52Updated 8 months ago
- Structural variant VCF annotation, duplicate removal and comparison☆34Updated last month
- Structural variant merging tool☆55Updated last year
- An accurate repeat detection from Nanopore data using deep learning and image techniques☆24Updated 2 years ago
- MethPhaser: methylation-based haplotype phasing of human genomes☆50Updated 8 months ago
- Complex structural variant visualization for HiFi sequencing data☆44Updated last month
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆58Updated 3 years ago
- A tutorial on structural variant calling for short read sequencing data☆38Updated last year
- fork of the GPU genome aligner☆24Updated last month
- Pipeline for structural variant image curation and analysis.☆49Updated 3 years ago
- Genotyping of segregating mobile elements insertions☆19Updated 4 years ago
- A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region exp…☆25Updated last month
- Tumour-only somatic mutation calling using long reads☆28Updated last year
- ☆29Updated 6 years ago
- Tools for merging Tandem Repeat VCF files☆37Updated 6 months ago
- Interpretable prioritization of splice variants in diagnostic next-generation sequencing☆18Updated last year