Alternatives and similar repositories for SNPs2CF:

Users that are interested in SNPs2CF are comparing it to the libraries listed below

• meganlsmith / delimitR
  This repository contains the code and manual for the R package delimitR.
  ☆17Updated 2 years ago
• omys-omics / triangulaR
  Calculate Hybrid Index and Heterozygosity from SNP data
  ☆10Updated 4 months ago
• jeetsukumaran / delineate
  Package for species delimitation analysis
  ☆10Updated 3 months ago
• LarsNauheimer / HybPhaser
  Workflow to detect and phase hybrids in target capture data
  ☆18Updated 2 years ago
• gehara / PipeMaster
  An R Package to build and simulate coalescent models
  ☆20Updated 11 months ago
• ribailey / gghybrid
  R package for analysis of hybrids and hybrid zones
  ☆20Updated last year
• edgardomortiz / paralog-finder
  Detects and blacklists paralog RAD loci analyzed in Stacks or ipyrad, based on the McKinney 2017 method (doi:10.1111/1755-0998.12613)
  ☆10Updated 5 years ago
• esayyari / DiscoVista
  ☆39Updated last year
• FePhyFoFum / SortaDate
  ☆18Updated 4 years ago
• stevemussmann / BayesAss3-SNPs
  Modification of BayesAss 3.0.4 to allow handling of large SNP datasets
  ☆16Updated 3 years ago
• FePhyFoFum / quartetsampling
  Quartet Sampling method for phylogenetic branch support evaluation
  ☆17Updated last year
• rbouckaert / starbeast3
  ☆17Updated 7 months ago
• rufimov / ParalogWizard
  ☆13Updated 3 weeks ago
• mgaynor1 / nQuack
  An R package for predicting ploidal level from sequence data using site-based heterozygosity 
  ☆15Updated 2 months ago
• blackrim / treePL
  Phylogenetic penalized likelihood
  ☆47Updated 8 months ago
• chaoszhang / TAPER
  Two-dimensional outlier detection algorithm for pinpointing errors in small species-specific stretches of the multiple sequence alignment…
  ☆12Updated 10 months ago
• jasonleebrown / UCE_phyluce_pipeline
  UCE Bioinformatics Pipeline
  ☆16Updated 4 months ago
• Tom-Jenkins / utility_scripts
  Scripts for population genetics analysis
  ☆20Updated 2 years ago
• BenjaminPeter / rangeexpansion
  ☆13Updated 7 years ago
• nstenz / TICR
  ☆26Updated 4 years ago
• millanek / fineRADstructure
  A package for population structure inference from RAD-seq data
  ☆31Updated 3 years ago
• lutteropp / QuartetScores
  Code for computing various support scores for internodes
  ☆19Updated 5 years ago
• LohseLab / gIMble
  A genome-wide IM blockwise likelihood estimation toolkit
  ☆16Updated 9 months ago
• gvbarroso / iSMC
  The integrated Sequentially Markovian Coalescent
  ☆13Updated last week
• mossmatters / phyloscripts
  Helper scripts for processing and visualization of phylogenetics datasets
  ☆28Updated last year
• thierrygosselin / assigner
  Population assignment analysis using R
  ☆17Updated 2 weeks ago
• bodkan / demografr
  Fast and simple simulation-based population genetic inference in R
  ☆27Updated 3 weeks ago
• sjoleary / SNPFILT
  ☆18Updated 7 years ago
• clairemerot / angsd_pipeline
  ☆26Updated last year
• mossmatters / MJPythonNotebooks
  Visualizing gene tree conflict using Phyparts, and ETE3
  ☆14Updated last year