strodel-group / TransMEPLinks
Transfer learning for Mutation Effect Prediction
☆17Updated last year
Alternatives and similar repositories for TransMEP
Users that are interested in TransMEP are comparing it to the libraries listed below
Sorting:
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆34Updated 2 years ago
- ☆36Updated last year
- A Unified Approach to Protein Engineering☆42Updated last year
- ☆71Updated 8 months ago
- Clusters protein chains based on CA distance difference☆16Updated 10 months ago
- ☆30Updated last year
- High-throughput framework for running molecular simulations for METL☆21Updated 2 months ago
- Implementation of Protein Invariant Point Packer (PIPPack)☆35Updated last year
- Results and data from the pilot round of the Protein Engineering Tournament☆30Updated 8 months ago
- ☆39Updated last year
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models☆58Updated last month
- Differentiable Pairing using Alignment-based Language Models☆24Updated last year
- Pretrained METL models with minimal dependencies☆16Updated 2 months ago
- ☆25Updated last week
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆50Updated last week
- One protein is all you need☆55Updated this week
- PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.☆30Updated 2 years ago
- Explore protein fold space with deep generative models☆16Updated last year
- Code for the paper "Learning to engineer protein flexibility".☆22Updated 2 weeks ago
- LatentDE: Latent-based Directed Evolution for Protein Sequence Design☆36Updated 8 months ago
- ☆26Updated 3 months ago
- Protein representation and design under a single training scheme☆22Updated 2 weeks ago
- Structure prediction of alternative protein conformations☆80Updated 9 months ago
- protein backbone refinement☆15Updated last year
- Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information☆32Updated last month
- Repository for Fast Non-autoregressive Inverse Folding with Discrete Diffusion☆18Updated last year
- protein structure generation with sparse all-atom denoising models☆49Updated 2 months ago
- dMaSIF implementation for google colab☆35Updated 2 years ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Updated this week
- Generative diverse protein backbones by protein language model☆34Updated last month