SouthGreenPlatform / VcfHunterLinks
VcfExplorer regroups several programs which principal aims are to map DNA and RNAseq data onto reference genome sequence, perform variant calling, manipulate vcf files, perform chromosome painting of accessions based on the contribution of ancestral groups, select marker for genetic map analysis and perform pairwise chromosome linkage of ordered…
☆14Updated last year
Alternatives and similar repositories for VcfHunter
Users that are interested in VcfHunter are comparing it to the libraries listed below
Sorting:
- Toolkit to convert the output of common variant calling programs to VCF☆23Updated 2 years ago
- GeneMark-ETP: gene finding in eukaryotic genomes supported by transcriptome sequencing and protein homology☆23Updated 3 months ago
- The stairway plot is a method for inferring detailed population demographic history using the site frequency spectrum (SFS) from DNA sequ…☆48Updated 2 years ago
- ☆42Updated 5 months ago
- A Nextflow pipeline for evaluating assembly quality☆35Updated this week
- Annotation helper tool for the manual curation of transposable element consensus sequences