Alternatives and similar repositories for DNAscanv2:

Users that are interested in DNAscanv2 are comparing it to the libraries listed below

• TNTurnerLab / HAT
  HAT is a set of tools for calling de novo variants from whole-genome sequencing data.
  ☆23Updated 11 months ago
• IrinaVKuznetsova / CirGO
  ☆21Updated 9 months ago
• shahcompbio / wgs
  Whole genome workflows
  ☆12Updated 3 months ago
• Gregor-Mendel-Institute / bookend
  End-guided RNA assembler
  ☆15Updated 3 months ago
• MarioniLab / sarlacc
  The R package "sarlacc" contains a pipeline to analyse nanopore sequencing data. It trims adapter sequences, retrieves optional UMI's, cl…
  ☆13Updated 6 years ago
• NCBI-Hackathons / HLAClustRView
  R package specialized in HLA typing clustering and visualization based on specific similarity metrics
  ☆12Updated 5 years ago
• gagneurlab / splicemap
  ☆19Updated 4 months ago
• WGLab / AmpBinner
  A barcode demultiplexer for Oxford Nanopore long-read amplicon sequencing data
  ☆10Updated 3 months ago
• bartongroup / 2passtools
  Two pass alignment for long reads
  ☆21Updated 3 years ago
• comprna / R2Dtool
  Analyse RNA feature distributions.
  ☆15Updated 2 months ago
• zhongzhd / ont_m6a_detection
  ☆10Updated 6 months ago
• UMCUGenetics / COLO829_somaticSV
  Scripts and files used in the generation of the COLO829 somatic SV truthset.
  ☆12Updated 2 years ago
• gsneha26 / urWGS
  Ultra rapid nanopore whole genome sequencing pipeline, published in https://www.nature.com/articles/s41587-022-01221-5
  ☆19Updated 8 months ago
• flemingtonlab / SpliceTools
  ☆18Updated 7 months ago
• vladimirsouza / lrRNAseqVariantCalling
  Codes for the Iso-Seq variant-calling paper
  ☆11Updated last year
• daewoooo / StrandPhaseR
  R Package for phasing of single cell Strand-seq data
  ☆10Updated last month
• aganezov / RCK
  RCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypes
  ☆17Updated 4 years ago
• RacconC / gtftools
  ☆13Updated last year
• mdozmorov / RNA-seq
  RNA-seq analysis scripts
  ☆15Updated 2 years ago
• kuijjerlab / PySNAIL
  Smooth-quantile Normalization Adaptation for Inference of co-expression Links
  ☆16Updated last year
• CAST-genomics / haptools
  Ancestry and haplotype aware simulation of genotypes and phenotypes for complex trait analysis
  ☆21Updated this week
• xia-lab / Seq2Fun
  ☆16Updated 10 months ago
• Xinglab / isoCirc
  isoCirc
  ☆10Updated last year
• jhhung / EARRINGS
  EARRINGS: An efficient and ingenious adapter removal design for large-scale NGS meta-analyses
  ☆9Updated 2 weeks ago
• oicr-gsi / sequenza
  Workflow for Sequenza, cellularity and ploidy
  ☆19Updated 8 months ago
• CCICB / introme
  Introme prioritises coding and noncoding splice-altering variants for clinical variant interpretation
  ☆21Updated last week
• multiz / multiz
  DNA multiple sequence aligner, official version from Penn State's Miller Lab
  ☆31Updated 5 years ago
• RitchieLabIGH / iMOKA
  interactive Multi Objective K-mer Analysis
  ☆23Updated last year
• smlmbrt / SimilarityRegression
  Predicting TF sequence-specificity similarity with weighted alignments
  ☆13Updated 5 years ago