A simplified version of Dorado built on top of S/BLOW5 format.
☆39Jun 4, 2026Updated last week
Alternatives and similar repositories for slorado
Users that are interested in slorado are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- GPU CRF-CTC decoding for nanopore basecalling☆15Jun 1, 2026Updated last week
- The buttery eel - a slow5 guppy/dorado basecaller wrapper☆43Feb 13, 2026Updated 4 months ago
- A bioinformatics tool for viewing and calculating base modification frequencies from BAM files☆46May 29, 2026Updated 2 weeks ago
- A simple toolkit for manipulating nanopore signal data☆20Mar 14, 2026Updated 3 months ago
- A streaming method for mapping nanopore raw signals☆32Nov 7, 2021Updated 4 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- a tool for simulating nanopore raw signal data☆78Mar 4, 2026Updated 3 months ago
- Genopo a.k.a. F5N - A nanopore sequencing analysis toolkit for Android smartphones https://nanoporetech.com☆10Aug 2, 2021Updated 4 years ago
- Slow5tools is a toolkit for converting (FAST5 <-> SLOW5), compressing, viewing, indexing and manipulating data in SLOW5 format.☆106Jan 28, 2026Updated 4 months ago
- lossless nanopore pod5 <=> s/blow5 file conversion☆48Apr 30, 2026Updated last month
- slow5lib is a software library for reading & writing SLOW5 files.☆48Apr 17, 2026Updated last month
- RawHash can accurately and efficiently map raw nanopore signals to reference genomes of varying sizes (e.g., from viral to a human genome…☆69Jan 1, 2026Updated 5 months ago
- Wrapper to read fast5, slow5, blow5 and pod5 files.☆13Mar 26, 2025Updated last year
- A library and tool for accessing remote BLOW5 files.☆24Jun 3, 2026Updated last week
- Visualise and analyse nanopore (ONT) raw signals☆129Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- "nanoCEM" is a simple tool designed to visualize the features that distinguish between two groups of ONT data at the site level.☆18Oct 13, 2025Updated 8 months ago
- Here we proposed two novel algorithms, the Direct Subsequence Dynamic Time Warping for nanopore raw signal search (DSDTWnano) and the con…☆10Jul 13, 2020Updated 5 years ago
- Find Prokaryotic DNA methylase genes in proteins, contigs, or genomes☆13Jan 23, 2026Updated 4 months ago
- PHANTASM: PHylogenomic ANalyses for the TAxonomy and Systematics of Microbes☆26Dec 4, 2023Updated 2 years ago
- Quickly generate consensus assemblies for bacterial genomes☆14Sep 12, 2025Updated 9 months ago
- SquiggleKit: A toolkit for manipulating nanopore signal data☆128Feb 16, 2024Updated 2 years ago
- Assort phage protein sequences into phamilies using MMseqs2☆12Dec 16, 2024Updated last year
- InterARTIC - An interactive local web application for viral whole genome sequencing utilising the artic network pipelines..☆31Dec 27, 2023Updated 2 years ago
- Processing support for Greengenes2☆15Jul 31, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Methylation/modified base calling separated from basecalling.☆187Sep 17, 2024Updated last year
- ☆27Nov 14, 2025Updated 7 months ago
- Low level bindings and wrapper for slow5lib, an alternative for ONT Nanopore sequencing FAST5 output☆10Nov 5, 2024Updated last year
- ☆14Sep 11, 2023Updated 2 years ago
- Very fast ONT basecaller☆52Jun 17, 2022Updated 3 years ago
- Nanopore RNA-Seq data from the Singapore Nanopore-Expression Project☆161Jan 23, 2026Updated 4 months ago
- Predictive kmer models for development use☆64Jun 6, 2023Updated 3 years ago
- ☆85Jan 6, 2025Updated last year
- Ultra-fast methylation calling and event alignment tool for nanopore sequencing data (supports CUDA acceleration)☆164Mar 19, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Manipulate and generate figures for trees in Newick format☆22Jul 31, 2025Updated 10 months ago
- ☆15Jun 3, 2026Updated last week
- An extensible and performant aligner and read mapper☆75Jun 7, 2026Updated last week
- sfasta☆35Feb 25, 2026Updated 3 months ago
- Super-fast and accurate demultiplexing of direct RNA-seq runs.☆20Apr 7, 2026Updated 2 months ago
- Archived - new repo in README☆11Dec 12, 2024Updated last year
- DeepSelecNet is an enhanced deep learning model to perform read classification for selective sequencing.☆18Mar 5, 2023Updated 3 years ago