robotoD / GenoViLinks
GenoVi, an automated customizable circular genome visualizer for bacteria and archaea
☆101Updated 2 years ago
Alternatives and similar repositories for GenoVi
Users that are interested in GenoVi are comparing it to the libraries listed below
Sorting:
- A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category☆78Updated 8 months ago
- Program to quickly and accurately assemble plasmids in hybrid and long-only sequenced bacterial isolates☆83Updated 2 weeks ago
- Reorients assembled microbial sequences☆131Updated 5 months ago
- Automated long-read first bacterial genome assembly tool implemented in Snakemake using Snaketool.☆146Updated last week
- A python pipeline to identify IS (Insertion Sequence) elements in genome and metagenome☆101Updated last month
- Classification of Eukaryotic and Prokaryotic sequences from metagenomic datasets☆75Updated last year
- A toolbox for identifying mobile genetic element (MGE) insertions from short-read sequencing data of bacterial isolates.☆124Updated 2 years ago
- ARG normalization by mapping to the ARO ontology.☆62Updated 5 months ago
- A wrapper to identify, bin, classify, and predict host-viral relationship for viruses☆86Updated last year
- tiara – a tool for DNA sequence classification☆74Updated last year
- All of my various bioinformatic scripts fit for public consumption (loosely defining "fit")☆80Updated 2 years ago
- A tool to raise the quality of viral genomes assembled from short-read metagenomes via resolving and joining of contigs fragmented during…☆82Updated 4 months ago
- PANgenome with Annotations, COre identification, Tree and corresponding Alignments☆80Updated 2 years ago
- Binning Virus Genomes from Metagenomes☆68Updated 3 years ago
- ☆23Updated last year
- GTDB taxonomy taxdump files with trackable TaxIds☆57Updated 8 months ago
- MuDoGeR makes the recovery of genomes from prokaryotes, viruses, and eukaryotes from metagenomes easy.☆89Updated last year
- Bioinformatics tool to find integrons in bacterial genomes☆82Updated 8 months ago
- DDBJ Fast Annotation and Submission Tool☆83Updated 4 months ago
- ☆81Updated last month
- Supporting code for uncultivated gut virus manuscript☆78Updated 2 years ago
- Python code for versatile Functional Ontology Assignments for Metagenomes searching via Hidden Markov Model (HMM) with environmental focu…☆63Updated last month
- A modular end-to-end suite for in silico recovery, clustering, and analysis of prokaryotic, microeukaryotic, and viral genomes from metag…☆99Updated 3 months ago
- Bioinformatics tool for Locus Visualisation☆157Updated 2 months ago
- BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a f…☆37Updated 6 years ago
- Reference-quality genome reconstruction from complex metagenomes (or bacterial isolates) using only Nanopore long reads or both long and …☆33Updated 2 years ago
- Prediction of prophages from bacterial genomes☆81Updated 7 months ago
- ☆65Updated last year
- viralVerify: viral contig verification tool☆73Updated 4 years ago
- Tool to estimate genome quality of microbial eukaryotes☆38Updated 5 months ago