dietvin / pod5ViewerLinks
GUI for inspecting POD5 files
☆31Updated 9 months ago
Alternatives and similar repositories for pod5Viewer
Users that are interested in pod5Viewer are comparing it to the libraries listed below
Sorting:
- A local-haplotagging-based small and structural variant caller☆80Updated 3 weeks ago
- Pipeline to convert a haploid assembly into diploid☆103Updated 7 months ago
- Adapter trimmer for Oxford Nanopore reads using ab initio method☆51Updated 9 months ago
- Splitting of sequence reads by internal adapter sequence search☆51Updated 2 years ago
- Call select base modifications in PacBio HiFi reads☆14Updated 7 months ago
- Hybrid error correction of long reads using colored de Bruijn graphs☆104Updated 2 weeks ago
- ☆66Updated 2 weeks ago
- ☆30Updated last year
- Panacus is a tool for computing statistics for GFA-formatted pangenome graphs☆110Updated last month
- Tiberius is a deep learning gene finder.☆73Updated 2 weeks ago
- A program for assessing the T2T genome continuity☆84Updated this week
- Snakemake workflow for bacterial genome assembly + polishing for Oxford Nanopore (ONT) sequencing using multiple tools.☆27Updated last year
- Mumemto: multi-MUM and MEM finding across pangenomes☆111Updated 2 months ago
- A repository for collecting GPU basecalling stats☆64Updated this week
- ☆117Updated this week
- TSEBRA: Transcript Selector for BRAKER☆48Updated 10 months ago
- Taxonomic classifier for sequencing reads (bulk and single-cell data, short and long read) using FM-index with run-block compressed BWT.☆65Updated last week
- k-mer learning materials☆74Updated 7 months ago
- High-quality Nanopore-only genome polisher☆69Updated last year
- ☆76Updated 8 months ago
- Protein hint generation pipeline for gene finding in eukaryotic genomes☆60Updated last year
- Read Until client library for Nanopore Sequencing☆104Updated 11 months ago
- SRF: Satellite Repeat Finder☆97Updated last year
- Simple pileup-based variant caller☆91Updated 4 months ago
- Joint structural variant and copy number variant caller for HiFi sequencing data☆60Updated this week
- Visualise and analyse nanopore (ONT) raw signals☆121Updated 2 weeks ago
- ☆45Updated 3 weeks ago
- A short analysis of Oxford Nanopore consensus accuracy for bacterial genome assemblies☆60Updated 6 years ago
- 🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies☆108Updated 2 months ago
- A small bash script that automates sweeping Guppy parameters in an attempt to optimise basecalling rate☆30Updated 3 years ago