dietvin / pod5Viewer
GUI for inspecting POD5 files
☆26Updated 3 months ago
Alternatives and similar repositories for pod5Viewer:
Users that are interested in pod5Viewer are comparing it to the libraries listed below
- Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers☆33Updated last year
- PSAURON is a machine learning model for rapid assessment of protein coding gene annotation☆31Updated last week
- Linear-time de novo Long Read Assembler☆39Updated last month
- VACmap: a long-read aligner specifically designed for complex structural variation discovery☆34Updated 4 months ago
- A local-haplotagging-based small and structural variant caller☆31Updated this week
- Tiberius is a deep learning gene finder.☆52Updated this week
- ☆61Updated last week
- MarginPolish: Graph based assembly polishing☆46Updated 4 years ago
- Adapter trimmer for Oxford Nanopore reads using ab initio method☆40Updated 4 months ago
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆35Updated this week
- The SYNY pipeline investigates synteny between species by reconstructing protein clusters from gene pairs.☆40Updated last week
- Call select base modifications in PacBio HiFi reads☆2Updated last month
- perSVade: personalized Structural Variation detection☆38Updated last month
- Splitting of sequence reads by internal adapter sequence search☆51Updated last year
- ☆77Updated last month
- A small bash script that automates sweeping Guppy parameters in an attempt to optimise basecalling rate☆30Updated 2 years ago
- Identify short variants and structural variants from raw sequencing data or genomic sequences☆25Updated last year
- Pipeline to convert a haploid assembly into diploid☆100Updated 2 months ago
- TSEBRA: Transcript Selector for BRAKER☆47Updated 4 months ago
- A program for assessing the T2T genome continuity☆70Updated 3 weeks ago
- Classifier for metagenomic sequences using FM-index with run-block compressed BWT.☆57Updated last week
- Fast and scalable nanopore adaptive sampling☆33Updated last year
- Correcting errors in noisy long reads using variation graphs☆51Updated 2 years ago
- ☆32Updated 4 years ago
- Mumemto: multi-MUM and MEM finding across pangenomes☆76Updated last week
- ☆28Updated last year
- tools for assessing the accuracy of genome assemblies☆34Updated 11 months ago
- STAG: Species Tree from All Genes☆34Updated 6 years ago
- Remove lambda phage reads from a fastq file☆29Updated 2 years ago
- A tool for evaluating long-read de novo assembly results☆33Updated 7 months ago