dietvin / pod5ViewerLinks
GUI for inspecting POD5 files
☆30Updated 7 months ago
Alternatives and similar repositories for pod5Viewer
Users that are interested in pod5Viewer are comparing it to the libraries listed below
Sorting:
- A local-haplotagging-based small and structural variant caller☆78Updated last week
- Adapter trimmer for Oxford Nanopore reads using ab initio method☆45Updated 8 months ago
- Splitting of sequence reads by internal adapter sequence search☆51Updated 2 years ago
- ☆63Updated 2 weeks ago
- Tiberius is a deep learning gene finder.☆69Updated this week
- Pipeline to convert a haploid assembly into diploid☆102Updated 6 months ago
- ☆73Updated 7 months ago
- TSEBRA: Transcript Selector for BRAKER☆47Updated 8 months ago
- MarginPolish: Graph based assembly polishing☆46Updated 4 years ago
- Call select base modifications in PacBio HiFi reads☆10Updated 6 months ago
- ☆30Updated last year
- k-mer learning materials☆73Updated 5 months ago
- Hybrid error correction of long reads using colored de Bruijn graphs☆102Updated 10 months ago
- FastOMA is a scalable software package to infer orthology relationship.☆78Updated last month
- vcfdist: Accurately benchmarking phased variant calls☆83Updated 2 weeks ago
- A bioinformatics tool for viewing and calculating base modification frequencies from BAM files☆33Updated 2 weeks ago
- A small bash script that automates sweeping Guppy parameters in an attempt to optimise basecalling rate☆30Updated 3 years ago
- A program for assessing the T2T genome continuity☆83Updated last month
- Joint structural variant and copy number variant caller for HiFi sequencing data☆59Updated 2 weeks ago
- Panacus is a tool for computing statistics for GFA-formatted pangenome graphs☆111Updated this week
- Mumemto: multi-MUM and MEM finding across pangenomes☆103Updated 3 weeks ago
- Visualise and analyse nanopore (ONT) raw signals☆119Updated 2 weeks ago
- The SYNY pipeline investigates synteny between species by reconstructing protein clusters from gene pairs.☆43Updated 3 weeks ago
- The buttery eel - a slow5 guppy/dorado basecaller wrapper☆40Updated last week
- Evaluating genome assemblies☆100Updated 2 weeks ago
- a tool for simulating nanopore raw signal data☆68Updated 10 months ago
- Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers☆33Updated last year
- Split k-mer analysis – version 2☆87Updated 2 weeks ago
- Alignment-free genotyper for SNPs and short indels, implemented in Python.☆49Updated 5 months ago
- Show pangenome graphs in an easy way☆56Updated last week