yukiteruono / pbsim3Links
PBSIM3: a simulator for all types of PacBio and ONT long reads
☆86Updated 8 months ago
Alternatives and similar repositories for pbsim3
Users that are interested in pbsim3 are comparing it to the libraries listed below
Sorting:
- A list of software for pangenomics☆165Updated 2 weeks ago
- Visualise and analyse nanopore (ONT) raw signals☆126Updated 2 weeks ago
- Pipeline to convert a haploid assembly into diploid☆108Updated 11 months ago
- Collection of tools for the analysis of CpG data☆102Updated 5 months ago
- Pangenome-based genome inference☆152Updated 3 weeks ago
- Tandem repeat genotyping and visualization from PacBio HiFi data☆129Updated 3 weeks ago
- Phased assembly variant caller☆130Updated last year
- ☆121Updated last month
- Panacus is a tool for computing statistics for GFA-formatted pangenome graphs☆116Updated 2 weeks ago
- De novo assembly from Oxford Nanopore reads.☆88Updated last month
- Wally: Visualization of aligned sequencing reads and contigs☆120Updated 2 months ago
- ☆144Updated last month
- Yet another k-mer analyzer☆153Updated this week
- Read Until client library for Nanopore Sequencing☆107Updated last year
- Structural Variant Identification Method using Genome Assemblies☆129Updated 3 years ago
- This is the standalone version of the EviAnn pipeline☆134Updated last week
- Assemblies from HPP Year 1 production☆79Updated 2 years ago
- A complete diploid human genome☆140Updated 3 months ago
- Research release basecalling models and configurations☆117Updated 7 months ago
- Splitting of sequence reads by internal adapter sequence search☆51Updated 2 years ago
- accurate LiftOver tool for new genome assemblies☆145Updated last year
- ☆119Updated 2 months ago
- Detecting genome structural variants with deep learning in single molecule sequencing☆115Updated 8 months ago
- A local-haplotagging-based small and structural variant caller☆90Updated last week
- 🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies☆116Updated last month
- a Bioinformatics Application for Navigating De novo Assembly Graphs Easily☆152Updated this week
- Aligns short reads using dynamic seed size with strobemers☆186Updated last week
- A tool for somatic structural variant calling using long reads☆158Updated 2 months ago
- Copy number caller for long read data including SNV utilization☆68Updated 8 months ago
- Reference-based variant calling pipeline for a pair of phased haplotype assemblies☆105Updated 4 years ago