HAlign 4: A New Strategy for Rapidly Aligning Millions of Sequences
☆19May 23, 2026Updated 2 months ago
Alternatives and similar repositories for HAlign-4
Users that are interested in HAlign-4 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆14Apr 28, 2020Updated 6 years ago
- PG-SCUnK mesure quality of Pan-Genome Graphs using Single Copy and Universal k-mers☆25Feb 16, 2026Updated 5 months ago
- Minipoa: A minimizer-based method for fast and memory-efficient partial order alignment☆18May 23, 2026Updated 2 months ago
- The complete sequence of a Chinese individual☆14Oct 8, 2024Updated last year
- A rapid and low-memory multiple-genome aligner for closely related genomes☆26Sep 3, 2025Updated 11 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A haplotype-resolved and telomere-to-telomere genome assembly pipeline (PHap) tailored for autopolyploids, relying solely on common seque…☆30Jul 29, 2025Updated last year
- convert alignment bam to pairwise alignment or multiple sequence alignment (msa) at genome specific region☆13May 21, 2024Updated 2 years ago
- base-level dotplots from PAF alignments☆35Sep 18, 2025Updated 10 months ago
- plot Multiple Sequence Alignment(MSA) of Clustal by python package☆14Mar 14, 2023Updated 3 years ago
- Generate alternative long reads with the help of target`s assemblies, target`s PacBio HiFi reads and reference genome.☆20Mar 25, 2026Updated 4 months ago
- A complete telomere-to-telomere assembly of sheep: T2T-sheep1.0☆21Nov 2, 2024Updated last year
- Taxonomy classification of viral sequences / contigs☆13Jul 15, 2025Updated last year
- ☆12Jun 7, 2024Updated 2 years ago
- ☆16Apr 3, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Annotate Olfactory receptor CDS from genome☆11Apr 29, 2023Updated 3 years ago
- QuickProt: A Fast and Accurate Homology-Based Protein Annotation Tool for Non-Model Organisms to Advance Comparative Genomics☆25Jul 1, 2026Updated last month
- Portable solution to generate genome alignment chains using lastz☆69Updated this week
- Centromics: visualing centromeres with multiple omics data☆27Mar 4, 2025Updated last year
- ☆15Apr 16, 2026Updated 3 months ago
- Variant Calling for the HPRC2☆16May 26, 2026Updated 2 months ago
- An ultra-fast gzip file tools☆28Jun 23, 2026Updated last month
- ☆18Jan 29, 2025Updated last year
- ☆28May 12, 2026Updated 3 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- A comprehensive telomere annotation tool for genome assemblies and graphs.☆18Aug 5, 2026Updated last week
- A gap-closing software tool that uses long reads to enhance genome assembly.☆24Apr 25, 2024Updated 2 years ago
- Repeat and haplotype aware error correction in nanopore sequencing reads with DeChat☆29Apr 24, 2026Updated 3 months ago
- Hybrid error correction approach for long reads using overlap graph☆11Sep 26, 2023Updated 2 years ago
- Toy files and training material to introduce Linux to molecular biologists☆22Jul 21, 2023Updated 3 years ago
- Genome Assembly 102☆19Apr 23, 2025Updated last year
- ☆32Mar 3, 2026Updated 5 months ago
- The tools are used for displaying hic signal of genome☆26Jan 4, 2021Updated 5 years ago
- Python wrapper for wavefront alignment using WFA2-lib☆39Nov 19, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A bioinformatics tool written in Rust to find palindromic sequences in DNA☆39Feb 20, 2026Updated 5 months ago
- blastn2dotplots: multiple dot-plot visualizer☆29Sep 15, 2025Updated 11 months ago
- Telomere local assembly, Improved whole genome polish, and Plastid assembly☆22Apr 25, 2025Updated last year
- Genome annotation pre-publication results☆38Updated this week
- ☆42May 19, 2025Updated last year
- ☆23Jan 13, 2026Updated 7 months ago
- Detection of outlier genes and species in phylogenomics☆19Dec 14, 2025Updated 8 months ago