R toolkit for inference and analysis of pathway-mediated cell-cell communication chain from single-cell transcriptomics
☆37Mar 10, 2025Updated last year
Alternatives and similar repositories for CommPath
Users that are interested in CommPath are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A novel computational method for inferring cell-type-specific signaling networks using single-cell transcriptomics data for better charac…☆45Oct 10, 2025Updated 7 months ago
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆26Feb 22, 2025Updated last year
- Unsupervised Inference of Developmental Directions for Single Cells☆25Jan 12, 2024Updated 2 years ago
- An R library for conducting analyses on COMPASS data.☆16Jun 10, 2021Updated 4 years ago
- Estimation of Single-Cell Potency with Single Cell Entropy☆46Apr 12, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Implementation of MaSigPro for scRNA-Seq Data☆19Jul 31, 2024Updated last year
- FitDevo: accurate inference of single-cell developmental potential using sample-specific gene weight☆17Apr 7, 2024Updated 2 years ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆31Aug 16, 2021Updated 4 years ago
- Single-cell Mutual Information-based Network Engineering Ranger☆25Aug 28, 2025Updated 9 months ago
- Custom codes accompanying single cell spatial transcriptomic study on the healthy human lung☆15Dec 27, 2023Updated 2 years ago
- Transcriptomics Visualization R package.☆76May 21, 2026Updated 2 weeks ago
- A High Effect Marker Gene Search Tool for Single-cell RNA-seq Analysis☆35Sep 14, 2024Updated last year
- ☆24Jul 9, 2025Updated 10 months ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆41Nov 10, 2025Updated 6 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A computational method to rank and infer drug-responsive cell population towards in-silico drug perturbation using a target-perturbed gen…☆74Oct 16, 2025Updated 7 months ago
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆31Oct 24, 2024Updated last year
- Landscape Single Cell Entropy☆23Aug 24, 2020Updated 5 years ago
- ☆16Jan 24, 2023Updated 3 years ago
- ☆89Jun 29, 2024Updated last year
- Cell-cell communication and lineage inference for scRNA-seq data☆25May 3, 2023Updated 3 years ago
- Cell Annotation using Machine Learning-based method for the presence of Unknown cells (CAMLU)☆13May 19, 2025Updated last year
- Scalable, downsampling-free automated cell-population discovery, feature engineering, classification and visualization of single-cell (mo…☆12Aug 30, 2021Updated 4 years ago
- Codes for the scPLC project☆75Dec 2, 2022Updated 3 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆13Sep 30, 2024Updated last year
- ☆49Feb 7, 2024Updated 2 years ago
- Pipeline of time-ordered gene coexpression network (TO-GCN) construction from three-dimensional (gene expression, condition, and time) da…☆54Jul 13, 2023Updated 2 years ago
- ☆59Jan 2, 2024Updated 2 years ago
- Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data☆62Jul 22, 2024Updated last year
- ☆38Apr 20, 2026Updated last month
- ☆10Nov 5, 2023Updated 2 years ago
- ☆14Oct 11, 2019Updated 6 years ago
- The first computational tool that enables both unsupervised and supervised discovery of tissue spatial domains☆34Apr 11, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Analysis of cell-cell communication at single-cell resolution☆107Sep 10, 2024Updated last year
- ☆62Jul 23, 2024Updated last year
- ☆10Dec 15, 2024Updated last year
- scplotter is an R package that is built upon plotthis. It provides a set of functions to visualize single-cell sequencing and spatial dat…☆303May 26, 2026Updated last week
- Manifold learning to detect cell-cell interactions.☆59May 19, 2026Updated 3 weeks ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆35Apr 4, 2025Updated last year
- ☆30Sep 29, 2025Updated 8 months ago