Alternatives and similar repositories for OmicsNetR:

Users that are interested in OmicsNetR are comparing it to the libraries listed below

• zpliulab / scGENA
  single cell Gene co-Expression Network Analysis
  ☆9Updated 2 years ago
• bzhanglab / OmicsEV
  A tool for large scale omics datasets evaluation
  ☆24Updated last year
• saezlab / MetaProViz
  R-package to perform metabolomics pre-processing, differential metabolite analysis, metabolite clustering and custom visualisations.
  ☆13Updated this week
• waldronlab / SingleCellMultiModal
  Single Cell multimodal data scripts for downloading datasets
  ☆17Updated 3 months ago
• unistbig / netGO
  R/Shiny package for network-integrated pathway enrichment analysis
  ☆14Updated 4 years ago
• pnnl / leapR
  ☆17Updated 2 months ago
• abodein / timeOmics
  Time-Course Multi-Omics data integration
  ☆24Updated 10 months ago
• singha53-zz / diablo
  DIABLO - an integrative multi-group, multi-dataset classification method
  ☆22Updated 5 years ago
• yigbt / multiGSEA
  The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.
  ☆17Updated last month
• jokergoo / BioMartGOGeneSets
  Gene Ontology Gene Sets from BioMart
  ☆12Updated last year
• jaspershen / MetNormalizer
  MetNormalizer is used to normalize large scale metabolomics data.
  ☆20Updated 3 years ago
• jsychong / MetaboAnalystR
  ☆10Updated 5 years ago
• andreasmock / MetaboDiff
  ☆30Updated 4 years ago
• datapplab / SBGNview
  ☆26Updated last year
• liuhong-jia / scAnno
  ☆23Updated last year
• SlavovLab / SCoPE2
  ☆18Updated last year
• cwieder / py-ssPA
  Single sample pathway analysis tools for omics data
  ☆12Updated 3 months ago
• OSU-BMBL / IRIS
  A Shiny web server for interactive visualization and analysis of RNA-seq data
  ☆22Updated 3 years ago
• UCLouvain-CBIO / scp
  Single cell proteomics data processing
  ☆25Updated 4 months ago
• Accio / KEGGgraph
  The KEGGgraph package to parse KEGG pathways in R into graph objects
  ☆13Updated last year
• YuLab-SMU / meshes
  MeSH Enrichment and Semantic analyses
  ☆11Updated 3 months ago
• pwwang / immunopipe
  Integrative analysis for scTCR- and scRNA-seq data
  ☆15Updated this week
• SamBuckberry / RUN-WGCNA
  Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)
  ☆28Updated 9 years ago
• jokergoo / IlluminaHumanMethylationEPICv2anno.20a1.hg38
  ☆14Updated 10 months ago
• jokergoo / KeywordsEnrichment
  ☆32Updated last year
• PFPrzytycki / CellWalkR
  CellWalkR: An R Package for integrating single-cell and bulk data to resolve regulatory elements
  ☆10Updated 3 months ago
• OSU-BMBL / ssread
  A single-cell and spatial RNA-seq database for Alzheimer’s Disease
  ☆22Updated 7 months ago
• nasqar / ClusterProfShinyGSEA
  A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries
  ☆18Updated 5 years ago
• jokergoo / BioCartaImage
  BioCarta pathway images
  ☆11Updated last year
• UCLouvain-CBIO / depmap
  Cancer Dependency Map package
  ☆27Updated 6 months ago