Alternatives and similar repositories for OmicsNetR

Users that are interested in OmicsNetR are comparing it to the libraries listed below

• saezlab / MetaProViz
  R-package to perform metabolomics pre-processing, differential metabolite analysis, metabolite clustering and custom visualisations.
  ☆16Updated last week
• unistbig / netGO
  R/Shiny package for network-integrated pathway enrichment analysis
  ☆13Updated 5 years ago
• liuhong-jia / scAnno
  ☆25Updated 6 months ago
• JamesJoly / DGSEA
  An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…
  ☆14Updated 2 years ago
• lucidif / HiCeekR
  R package that allows easily performing a complete Hi-C data analysis through a Graphical User Interface
  ☆16Updated 4 years ago
• dzhakparov / GeneSelectR
  ☆23Updated last year
• hancockinformatics / pathlinkR
  Analysis and visualization of RNA-Seq results
  ☆30Updated this week
• dbdimitrov / BingleSeq
  BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses
  ☆22Updated 4 years ago
• yafeng / DEqMS
  DEqMS is a tool for quantitative proteomic analysis
  ☆24Updated 7 months ago
• myles-lewis / glmmSeq
  Gene-level general linear mixed model
  ☆23Updated 2 months ago
• XSLiuLab / tumor-immunogenicity-score
  TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020
  ☆33Updated 4 years ago
• Core-Bioinformatics / ClustAssess
  Tools for assessing clustering robustness
  ☆28Updated 3 months ago
• saezlab / cosmosR
  COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…
  ☆63Updated last month
• bartongroup / Proteus
  R package for analysing proteomics data
  ☆50Updated 2 years ago
• UCLouvain-CBIO / depmap
  Cancer Dependency Map package
  ☆30Updated last year
• sigven / oncoEnrichR
  Explore the cancer relevance of your gene list
  ☆52Updated last week
• eudoraleer / scasa
  SCASA: Single cell transcript quantification tool
  ☆22Updated 2 years ago
• erhard-lab / price
  Improved Ribo-seq enables identification of cryptic translation events
  ☆16Updated 7 years ago
• bzhanglab / OmicsEV
  A tool for large scale omics datasets evaluation
  ☆23Updated 2 years ago
• OSU-BMBL / IRIS
  A Shiny web server for interactive visualization and analysis of RNA-seq data
  ☆22Updated 4 years ago
• sunshanwen / BP4RNAseq
  An automated pipe for reproducible RNA-seq analysis with the minimal efforts from researchers. You only need to provide the taxa name and…
  ☆14Updated 3 years ago
• OSU-BMBL / ssread
  A single-cell and spatial RNA-seq database for Alzheimer’s Disease
  ☆26Updated last year
• metaOmics / metaOmics
  Shiny GUI application for genomics meta-analysis
  ☆22Updated 5 years ago
• const-ae / proDA
  Protein Differential Abundance for Label-Free Mass Spectrometry https://const-ae.github.io/proDA/
  ☆21Updated 2 years ago
• jokergoo / cola
  A General Framework for Consensus Partitioning
  ☆63Updated 10 months ago
• showteeth / GEfetch2R
  GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools
  ☆39Updated 8 months ago
• ed-lau / jcast
  Junction centric alternative splicing translator
  ☆21Updated 3 years ago
• ShixiangWang / Variants2Neoantigen
  A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)
  ☆29Updated 6 years ago
• AstraZeneca / Omicsfold
  Multi-omics data normalisation, model fitting and visualisation.
  ☆28Updated 2 years ago
• almeidasilvaf / BioNERO
  Easy and comprehensive biological network reconstruction and analysis
  ☆34Updated 2 months ago