chenhcs / scResolveLinks
☆13Updated last year
Alternatives and similar repositories for scResolve
Users that are interested in scResolve are comparing it to the libraries listed below
Sorting:
- scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…☆16Updated 3 weeks ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆31Updated 10 months ago
- ☆13Updated last year
- ☆25Updated 2 years ago
- A computational tool for identification of 3D multi-modal spatial neighborhoods☆15Updated 5 months ago
- ☆17Updated last year
- ☆13Updated 2 years ago
- Toolbox of the Human Neural Organoid Cell Atlas☆27Updated 2 weeks ago
- Integrating temporal gene expression modalities for trajectory inference and disease prediction☆10Updated 3 years ago
- Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights i…☆17Updated last year
- R and MATLAB scripts for MAGICAL☆11Updated last year
- ☆11Updated 2 years ago
- Computational pipeline to process EasySci-RNA data.☆22Updated last year
- python API to the CoGAPS NMF package☆19Updated 7 months ago
- ☆25Updated 9 months ago
- ☆25Updated 9 months ago
- Code, data and analysis for moslin.☆15Updated last year
- R package for generalized binary covariance decomposition.☆13Updated 5 months ago
- Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids☆30Updated 2 years ago
- Python code for cross-condition label refinement in single-cell data with HiDDEN☆14Updated last year
- Code used to process the data of the HBCA project☆32Updated last year
- Trends in single cell papers☆16Updated last year
- ☆13Updated 3 years ago
- A sandbox for benchmarking detection of out-of-reference cells in single-cell genomics data☆13Updated last year
- STHD: probabilistic cell typing of Single spots in whole Transcriptome spatial data with High Definition☆35Updated 8 months ago
- Scanner of specific spatial patterns in tissues☆14Updated 3 years ago
- Hotspot cluster distance analysis in spatial transcriptomic data☆33Updated 11 months ago
- Code for spatial subclone paper☆16Updated 11 months ago
- Code to go along with https://doi.org/10.1016/j.cell.2022.09.010☆21Updated 3 years ago
- cell type specific, trait-associated gene regulation☆29Updated 9 months ago