WPZgithub / CEFCON
Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data
☆22Updated 3 months ago
Alternatives and similar repositories for CEFCON:
Users that are interested in CEFCON are comparing it to the libraries listed below
- ☆34Updated last year
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆33Updated 6 months ago
- Spatial direct messaging detected by bivariate Moran☆24Updated 2 weeks ago
- Data processing and analysis workflow for GAGE-seq, a coassay of single-cell HiC and single-cell RNA-seq☆11Updated 10 months ago
- ☆23Updated 3 weeks ago
- ☆39Updated this week
- ☆44Updated 8 months ago
- Python agent-based model tool for inference, visualization and analysis of cell-cell communication from single-cell data☆24Updated last month
- Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional…☆21Updated 4 months ago
- an integrative algorithm to distinguish spatially variable cell subclusters by reconstructing cells onto a pseudo space with spatial tran…☆22Updated last year
- ESICCC: A systematic computational framework for evaluation, selection and integration of cell-cell communication inference methods☆12Updated last year
- ☆26Updated last year
- Python implementation of Gene Trajectory☆24Updated 4 months ago
- PhyloVelo, Phylogeny-based transcriptomic velocity of single cells☆42Updated last year
- PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.☆28Updated last year
- SIMBA: SIngle-cell eMBedding Along with features☆18Updated 9 months ago
- inferring regulatory cellular dynamics☆27Updated last week
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆30Updated this week
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆22Updated 2 weeks ago
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆30Updated last year
- STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …☆22Updated last year
- The first computational tool that enables both unsupervised and supervised discovery of tissue spatial domains☆26Updated 11 months ago
- CeLEry: cell location recovery in single-cell RNA sequencing☆32Updated this week
- ☆19Updated 3 weeks ago
- ☆20Updated 2 years ago
- Multimodal weakly supervised learning to identify disease-specific changes in single-cell atlases☆21Updated 2 months ago
- ☆10Updated last year
- ☆52Updated 6 months ago
- ☆43Updated 3 months ago