WPZgithub / CEFCONLinks
Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data
☆25Updated last year
Alternatives and similar repositories for CEFCON
Users that are interested in CEFCON are comparing it to the libraries listed below
Sorting:
- a computational framework to identify and characterize cell niches from spatial omics data at single-cell resolution☆43Updated 3 months ago
- ☆45Updated last year
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆39Updated last year
- ☆31Updated 9 months ago
- Detect hierarchical structures in cell-cell communications☆16Updated 10 months ago
- ☆40Updated this week
- PhyloVelo, Phylogeny-based transcriptomic velocity of single cells☆43Updated 2 months ago
- ☆30Updated 4 months ago
- ☆60Updated last year
- ☆50Updated last month
- ☆15Updated 5 months ago
- Python agent-based model tool for inference, visualization and analysis of cell-cell communication from single-cell data☆33Updated this week
- Data processing and analysis workflow for GAGE-seq, a coassay of single-cell HiC and single-cell RNA-seq☆15Updated last month
- ☆26Updated 2 years ago
- ☆50Updated 8 months ago
- Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional…☆26Updated last year
- CeLEry: cell location recovery in single-cell RNA sequencing☆35Updated 9 months ago
- CAST package☆41Updated last year
- Spatial direct messaging detected by bivariate Moran☆31Updated 4 months ago
- ☆26Updated last year
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆26Updated 9 months ago
- SIMBA: SIngle-cell eMBedding Along with features☆20Updated last year
- ESICCC: A systematic computational framework for evaluation, selection and integration of cell-cell communication inference methods☆12Updated last year
- an integrative algorithm to distinguish spatially variable cell subclusters by reconstructing cells onto a pseudo space with spatial tran…☆23Updated 2 years ago
- Predict RNA velocity through deep learning☆70Updated last year
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆41Updated 9 months ago
- A deep learning architecture for robust inference and accurate prediction of cellular dynamics☆69Updated 4 months ago
- A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative mod…☆25Updated 5 months ago
- Deep fusion of spatial transcriptomics and histology images for interpretable high-definition embedding mapping☆11Updated 3 months ago
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆33Updated 2 years ago