tanlabcode / CytoTalk
A novel computational method for inferring cell-type-specific signaling networks using single-cell transcriptomics data for better characterization of cell-cell communication.
☆37Updated 4 months ago
Alternatives and similar repositories for CytoTalk:
Users that are interested in CytoTalk are comparing it to the libraries listed below
- scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference☆37Updated 3 months ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 3 years ago
- R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.☆42Updated 2 weeks ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated 9 months ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆39Updated 10 months ago
- Bi-order integration (in silico multi-omics data) of single cell RNA sequencing, single cell ATAC sequencing, spacial transcriptomics and…☆34Updated last year
- ☆39Updated 3 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆31Updated 4 years ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆29Updated last month
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆26Updated last month
- Imputation method for scRNA-seq based on low-rank approximation